COL18A1 Gene Summary [Human]

This gene encodes the alpha chain of type XVIII collagen. This collagen is one of the multiplexins, extracellular matrix proteins that contain multiple triple-helix domains (collagenous domains) interrupted by non-collagenous domains. A long isoform of the protein has an N-terminal domain that is homologous to the extracellular part of frizzled receptors. Proteolytic processing at several endogenous cleavage sites in the C-terminal domain results in production of endostatin, a potent antiangiogenic protein that is able to inhibit angiogenesis and tumor growth. Mutations in this gene are associated with Knobloch syndrome. The main features of this syndrome involve retinal abnormalities, so type XVIII collagen may play an important role in retinal structure and in neural tube closure. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]

Details

Type
Protein Coding
Official Symbol
COL18A1
Official Name
collagen type XVIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2195]
Ensembl ID
ENSG00000182871
Bio databases IDs NCBI: 80781 Ensembl: ENSG00000182871
Aliases collagen type XVIII alpha 1 chain, endostatin
Synonyms COLLAGEN type XVIII, collagen, type XVIII, alpha 1, collagen type XVIII alpha 1 chain, collagen, type XVIII, α 1, collagen type XVIII α 1 chain, collagen XVIII, Endostatin, GLCC, KNO, KNO1, KS, MFP, Procollagen, Type XVIII
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human COL18A1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • NC1 domain
  • LamG
  • Fz domain
  • heparin binding domain
  • protein binding
  • identical protein binding
  • CRD_domain cysteine-rich domain, also known as Fz (frizzled) domain
  • Concanavalin A-like lectin/glucanases superfamily
  • Collagen trimerization domain
  • Endostatin-like
  • Collagenase NC10 and Endostatin
  • Domain of Unknown Function (DUF959)
  • Collagen triple helix repeat (20 copies)
  • laminin G domain

Pathways

Biological processes and signaling networks where the COL18A1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • Alzheimer disease
  • burn
  • endometriosis
  • liver cancer
  • cancer
  • epithelial cancer
  • epithelial neoplasia
  • metastasis
  • edema
  • hereditary disorder
regulated by
role in cell
  • expression in
  • apoptosis
  • phosphorylation in
  • growth
  • activation in
  • survival
  • proliferation
  • cell death
  • accumulation in
  • differentiation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • membrane fraction
  • Cytoplasm
  • cell surface
  • endoplasmic reticulum lumen
  • rough endoplasmatic reticulum
  • microfibrils
  • microfilaments
  • extracellular matrix
  • Golgi vesicles
  • exosomes
  • basement membrane
  • Bowman's membrane
  • endothelial basement membrane

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human COL18A1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • response to hydrostatic pressure
  • endothelial cell morphogenesis
  • skeletal system development
  • notochord development
  • angiogenesis
  • negative regulation of cell proliferation
  • cell adhesion
  • response to xenobiotic stimulus
  • collagen fibril organization
  • visual perception
  • organ morphogenesis

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum lumen
  • basement membrane
  • extracellular space
  • extracellular vesicular exosome
  • collagen
  • extracellular region

Molecular Function

What the gene product does at the molecular level
  • metal ion binding
  • extracellular matrix structural constituent conferring tensile strength

Gene-Specific Assays for Results You Can Trust

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