DDX47 Gene Summary [Human]

This gene encodes a member of the DEAD box protein family. DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure, such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. The protein encoded by this gene can shuttle between the nucleus and the cytoplasm, and has an RNA-independent ATPase activity. Two alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Retained Intron
Official Symbol
DDX47
Official Name
DEAD-box helicase 47 [Source:HGNC Symbol;Acc:HGNC:18682]
Ensembl ID
ENSG00000213782
Bio databases IDs NCBI: 51202 Ensembl: ENSG00000213782
Aliases DEAD-box helicase 47
Synonyms 4930588A18Rik, DEAD-box helicase 47, E4-DBP, HQ0256, MSTP162, RRP3
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human DDX47 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • helicase superfamily c-terminal domain
  • DEAD/DEAH box helicase
  • Type III restriction enzyme, res subunit
  • N-terminal helicase domain of the DEAD-box helicase superfamily
  • enzyme
  • protein binding
  • DEAD-like helicases superfamily
  • Helicase conserved C-terminal domain
  • P-loop containing Nucleoside Triphosphate Hydrolases

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • liver cancer
  • lung cancer
  • colon cancer
regulated by
  • SRPK1
  • SUMO2
  • amentoflavone
  • Complement component 1
  • myoblasts
  • MLN7243
role in cell
  • apoptosis
  • processing in
  • cellular reprogramming
  • pluripotency

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nucleoplasm
  • nucleoli

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human DDX47 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • RNA splicing
  • mRNA processing
  • rRNA processing
  • induction of apoptosis via death domain receptors

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • membrane
  • nucleolus
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • ATPase activity
  • ATP binding
  • RNA binding
  • protein binding
  • RNA helicase activity

Gene-Specific Assays for Results You Can Trust

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