Aff1 Gene Summary [Mouse]

This gene encodes a member of the AF4/ lymphoid nuclear protein related to the Fragile X E syndrome (FRAXE) family of proteins, which have been implicated in human childhood lymphoblastic leukemia, fragile chromosome X intellectual disability, and ataxia. It is the prevalent mixed-lineage leukemia fusion gene associated with spontaneous acute lymphoblastic leukemia. Members of this family have three conserved domains: an N-terminal homology domain, an AF4/ lymphoid nuclear protein domain, and a C-terminal homology domain. Knockout of the mouse gene by homologous recombination severely affects early events in lymphopoiesis, including precursor proliferation or recruitment, but is dispensable for terminal differentiation. In addition, an autosomal dominant missense mutation results in several phenotypes including ataxia and adult-onset Purkinje cell loss in the cerebellum, indicating a role in Purkinje cell maintenance and function. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2017]

Details

Type
Retained Intron
Official Symbol
Aff1
Official Name
AF4/FMR2 family, member 1 [Source:MGI Symbol;Acc:MGI:1100819]
Ensembl ID
ENSMUSG00000029313
Bio databases IDs NCBI: 17355 Ensembl: ENSMUSG00000029313
Aliases AF4/FMR2 family, member 1
Synonyms 9630032B01Rik, AF4, AF4/FMR2 family, member 1, AF4-MLL, ALF transcription elongation factor 1, FEL, MLL/AF4, MLLT2, Mllt2h, PBM1, Rob
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Aff1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • transcription regulator
  • serine-rich region
  • AF4 interaction motif
  • nuclear localization sequence
  • ALF homology domain
  • AFF4 C-terminal homology domain
  • AF-4 proto-oncoprotein C-terminal region
  • protein binding
  • MLL C-terminal homology domain
  • transcription factor activity
  • MLL N-terminal homology domain
  • AF-4 proto-oncoprotein N-terminal region

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • abdominal cancer
  • cancer
  • papillomatosis
  • squamous cell cancer
  • uterine cancer
  • tumorigenesis
  • female genital tract cancer
  • pelvic cancer
  • urogenital cancer
  • systemic lupus erythematosus
regulated by
  • AFF1
  • metformin
  • phytohemagglutinin
  • cisplatin
  • SIAH1
  • B lymphocytes
  • butyric acid
  • DNASE1
  • Influenza A virus (A/Bangkok/RX73(H3N2))
  • mir-128 (includes others)
regulates
role in cell
  • expression in
  • growth
  • activation in
  • quantity
  • recruitment in
  • number
  • differentiation
  • abnormal morphology
  • interaction in
  • elongation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Aff1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of gene expression

Cellular Component

Where in the cell the gene product is active
  • transcription elongation factor complex
  • ELL-EAF complex

Molecular Function

What the gene product does at the molecular level
  • protein binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.