Trim24 Gene Summary [Mouse]

The protein encoded by this gene is part of the tripartite-motif containing family (TRIM), which are typified by the RING, B-box type 1, B-box type 2, and coiled-coil region domains. This protein, which also contains a PHD/TTC finger and bromodomain important for regulating nuclear receptors and binding chromatin, has important roles in differentiation, development, and tissue homeostasis. This protein has been reported to regulate the activity of the tumor suppressor p53 and of the retinoic acid receptor. A translocation event between this gene and Braf transforming gene, which results in the fusion protein T18, has been reported in hepatocellular carcinomas. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, Jan 2013]

Details

Type
Retained Intron
Official Symbol
Trim24
Official Name
tripartite motif-containing 24 [Source:MGI Symbol;Acc:MGI:109275]
Ensembl ID
ENSMUSG00000029833
Bio databases IDs NCBI: 21848 Ensembl: ENSMUSG00000029833
Aliases tripartite motif-containing 24
Synonyms A130082H20Rik, D430004I05Rik, hTIF1, PTC6, RNF82, TF1A, TIF1, TIF1A, TIF1ALPHA, TIF1-α, tripartite motif-containing 24
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Trim24 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • coiled-coil (CC) domain of Drosophila brain tumor (brat) and similar proteins
  • PHD zinc finger
  • transcription regulator
  • LXXLL motif
  • protein kinase
  • transcription co-activator
  • B-Box C-terminal domain
  • chromatin binding
  • Bromodomain
  • zinc ion binding
  • RING finger (Really Interesting New Gene) domain and U-box domain superfamily
  • B-box zinc finger
  • histone binding
  • ligand-dependent nuclear receptor interactor
  • nucleic acid binding
  • ubiquitin protein ligase activity
  • HP1 binding domain
  • p53 binding
  • protein binding
  • receptor binding
  • sequence-specific DNA binding
  • B-box-type zinc finger superfamily
  • double-stranded DNA binding
  • ubiquitin-protein transferase activity
  • PHD finger superfamily

Pathways

Biological processes and signaling networks where the Trim24 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • epithelial cancer
  • epithelial neoplasia
  • cancer
  • liver cancer
  • liver neoplasia
  • digestive system cancer
  • abdominal cancer
  • organismal death
  • ovarian cancer
regulated by
role in cell
  • expression in
  • accumulation in
  • apoptosis
  • proliferation
  • differentiation
  • growth
  • phosphorylation in
  • colony formation by
  • ubiquitination in
  • innate immune response in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • chromatin fraction
  • perichromatin fibril
  • nuclear chromatin
  • heterochromatin
  • Cytoplasm
  • cytosol
  • nucleosomes
  • nucleoplasm
  • pronucleus
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Trim24 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • calcium ion homeostasis
  • protein catabolic process
  • transcription from RNA polymerase II promoter
  • regulation of apoptotic process
  • response to peptide hormone stimulus
  • cellular response to estrogen stimulus
  • regulation of protein stability
  • epithelial cell proliferation
  • negative regulation of transcription, DNA-dependent
  • regulation of vitamin D receptor signaling pathway
  • positive regulation of transcription, DNA-dependent
  • positive regulation of gene expression
  • negative regulation of epithelial cell proliferation
  • protein ubiquitination

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • euchromatin
  • perichromatin fibrils
  • mitochondrion
  • cytosol
  • chromatin
  • nucleoplasm
  • male germ cell nucleus

Molecular Function

What the gene product does at the molecular level
  • zinc ion binding
  • p53 binding
  • ligand-dependent nuclear receptor binding
  • protein binding
  • transcription coactivator activity
  • estrogen response element binding
  • methylated histone residue binding
  • histone acetyl-lysine binding
  • protein kinase activity
  • chromatin binding
  • receptor binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.