Capn5 Gene Summary [Mouse]

The protein encoded by this gene is a member of the calpain family of proteins. Unlike many members of the calpain gene family, this gene lacks a calmodulin-like domain, required for calcium binding. Mouse models for Huntington's disease displayed increased levels of the protein encoded by this gene. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2014]

Details

Type
Protein Coding
Official Symbol
Capn5
Official Name
calpain 5 [Source:MGI Symbol;Acc:MGI:1100859]
Ensembl ID
ENSMUSG00000035547
Bio databases IDs NCBI: 12337 Ensembl: ENSMUSG00000035547
Aliases calpain 5
Synonyms ADNIV, calpain 5, HTRA3, nCL-3, VRNI
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Capn5 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Calpain family cysteine protease
  • calpain
  • peptidase
  • protein binding
  • Calpain_III
  • CysPc
  • C2 domain

Pathways

Biological processes and signaling networks where the Capn5 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • colon cancer
  • vitreoretinopathy neovascular inflammatory
  • proliferative vitreoretinopathy
  • eosinophilic esophagitis
  • hereditary disorder
  • runting
  • infection by Hepatitis C virus genotype 2
  • infection by Hepatitis C virus
regulated by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • myelin enriched fraction
  • detergent resistant lipid raft fraction
  • cell surface
  • Nucleus
  • synapse

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Capn5 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • signal transduction
  • proteolysis

Cellular Component

Where in the cell the gene product is active
  • extracellular vesicular exosome
  • focal adhesion
  • cytoplasm
  • synapse
  • cell surface

Molecular Function

What the gene product does at the molecular level
  • calcium-dependent cysteine-type endopeptidase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.