Foxq1 Gene Summary [Mouse]

Enables DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II. Acts upstream of or within hair follicle morphogenesis. Predicted to be located in nucleus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; phalanx; and sensory organ. Orthologous to human FOXQ1 (forkhead box Q1). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Foxq1
Official Name
forkhead box Q1 [Source:MGI Symbol;Acc:MGI:1298228]
Ensembl ID
ENSMUSG00000038415
Bio databases IDs NCBI: 15220 Ensembl: ENSMUSG00000038415
Aliases forkhead box Q1
Synonyms forkhead box Q1, HFH-1, Hfh1l, sa
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Foxq1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA polymerase II transcription factor activity, sequence-specific DNA binding
  • transcription regulator
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional repressor activity
  • FH_FOX
  • double-stranded DNA binding
  • nucleic acid binding
  • sequence-specific DNA binding
  • Forkhead domain
  • FORKHEAD

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • epithelial cancer
  • liver cancer
  • colon carcinoma
  • colon epithelial cancer
  • diabetic nephropathy
  • HER2 negative hormone receptor negative breast cancer
  • colorectal cancer
  • hepatocellular carcinoma
  • colon adenoma
  • colon adenoma formation
regulated by
  • TP63
  • laduviglusib
  • dexamethasone
  • FGFR2
  • FOXF2
  • SETX
  • mir-378 (includes others)
  • dihydrotestosterone
  • beta-estradiol
  • SB203580
regulates
role in cell
  • expression in
  • invasion by
  • quantity
  • proliferation
  • migration
  • septation
  • paclitaxel resistance
  • cisplatin resistance
  • formation by
  • signaling in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Foxq1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of transcription from RNA polymerase II promoter
  • cell differentiation
  • hair follicle morphogenesis
  • anatomical structure morphogenesis
  • negative regulation of neuron apoptotic process
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • chromatin

Molecular Function

What the gene product does at the molecular level
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
  • sequence-specific DNA binding RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.