Arntl Gene Summary [Mouse]

The protein encoded by this gene is a basic helix-loop-helix protein that forms a heterodimer with Clock. This heterodimer binds E-box enhancer elements upstream of Period (Per1, Per2, Per3) and Cryptochrome (Cry1, Cry2) genes and activates transcription of these genes. Per and Cry proteins heterodimerize and repress their own transcription by interacting in a feedback loop with Clock/Arntl complexes. Defects in this gene have been linked to infertility, problems with gluconeogenesis and lipogenesis, and altered sleep patterns. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2014]

Details

Type
Protein Coding
Official Symbol
Arntl
Official Name
aryl hydrocarbon receptor nuclear translocator-like [Source:MGI Symbol;Acc:MGI:1096381]
Ensembl ID
ENSMUSG00000055116
Bio databases IDs NCBI: 11865 Ensembl: ENSMUSG00000055116
Aliases aryl hydrocarbon receptor nuclear translocator-like
Synonyms Arnt3, ARNTL, ARNTL1, basic helix-loop-helix ARNT like 1, bHLHe5, BMAL1b, bmal1b', BMAL1c, JAP3, MOP3, PASD3, TIC
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Arntl often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional activator activity
  • disorder 1 domain of mammalian ARNTL
  • transcription regulator
  • nucleic acid binding
  • PAS domain S-box
  • heat shock protein binding
  • PAS
  • basic Helix Loop Helix (bHLH) domain superfamily
  • transcription cofactor
  • transcription factor binding
  • protein binding
  • basic helix loop helix/Per Arnt Sim domain
  • sequence-specific DNA binding
  • PAS fold
  • DNA binding
  • RNA polymerase II transcription factor activity, sequence-specific DNA binding
  • aryl hydrocarbon receptor binding
  • PAS domain
  • double-stranded DNA binding
  • helix loop helix domain
  • PAS A-subdomain
  • Helix-loop-helix DNA-binding domain
  • transcription factor activity
  • protein heterodimerization

Pathways

Biological processes and signaling networks where the Arntl gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • COVID-19
  • schizophrenia
  • neurotic disorder
  • epithelial cancer
  • epithelial neoplasia
  • cancer
  • liver neoplasia
  • neoplasia
  • non-insulin-dependent diabetes mellitus
  • obesity
regulated by
regulates
role in cell
  • expression in
  • activation in
  • phosphorylation in
  • production in
  • differentiation
  • size
  • quantity
  • number
  • chondrogenesis
  • cellular subpopulation ratio

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • interchromatin granule cluster fractions
  • intracellular membrane-bounded organelle
  • Cytoplasm
  • cytosol
  • sister chromatids
  • nucleoplasm
  • nuclear bodies
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Arntl gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • positive regulation of transcription from RNA polymerase II promoter
  • positive regulation of circadian rhythm
  • regulation of hair cycle
  • regulation of insulin secretion
  • circadian regulation of gene expression
  • negative regulation of transcription, DNA-dependent
  • positive regulation of transcription, DNA-dependent
  • energy homeostasis
  • regulation of cell cycle
  • negative regulation of TOR signaling cascade
  • regulation of cellular senescence
  • oxidative stress-induced premature senescence
  • spermatogenesis
  • regulation of type B pancreatic cell development
  • negative regulation of fat cell differentiation
  • positive regulation of canonical Wnt receptor signaling pathway
  • regulation of transcription, DNA-dependent
  • circadian rhythm
  • regulation of transcription from RNA polymerase II promoter
  • response to redox state
  • proteasomal ubiquitin-dependent protein catabolic process
  • positive regulation of skeletal muscle cell differentiation
  • regulation of neurogenesis
  • negative regulation of glucocorticoid receptor signaling pathway

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • chromatoid body
  • PML body
  • intracellular membrane-bounded organelle
  • aryl hydrocarbon receptor complex
  • chromatin
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • protein binding
  • transcription cofactor activity
  • aryl hydrocarbon receptor binding
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • transcription regulatory region sequence-specific DNA binding
  • sequence-specific DNA binding
  • Hsp90 protein binding
  • protein dimerization activity
  • E-box binding
  • sequence-specific DNA binding RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.