Snapin Gene Summary [Rat]

The protein encoded by this gene is a coiled-coil-forming protein that associates with the SNARE (soluble N-ethylmaleimide-sensitive fusion protein attachment protein receptor) complex of proteins and the BLOC-1 (biogenesis of lysosome-related organelles) complex. Biochemical studies have identified additional binding partners. As part of the SNARE complex, it is required for vesicle docking and fusion and regulates neurotransmitter release. The BLOC-1 complex is required for the biogenesis of specialized organelles such as melanosomes and platelet dense granules. Mutations in gene products that form the BLOC-1 complex have been identified in mouse strains that are models of Hermansky-Pudlak syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2012]

Details

Type
Protein Coding
Official Symbol
Snapin
Official Name
SNAP-associated protein [Source:RGD Symbol;Acc:1560377]
Ensembl ID
ENSRNOG00000013356
Bio databases IDs NCBI: 295217 Ensembl: ENSRNOG00000013356
Aliases SNAP-associated protein
Synonyms 25-kDa synaptosomal-associated, BLOC1S7, BLOS7, BORCS3, Snap25bp, SNAPAP, SNAP-associated protein, SNAPIN beta, SNAPIN β
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Snapin often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • SNARE binding
  • SNAP-25 binding domain
  • PKC phosphorylation site
  • Snapin/Pallidin
  • coiled-coil domain
  • Pka phosphorylation site
  • protein binding
  • hydrophobic domain
  • phosphorylation site

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • cognitive impairment
regulates
role in cell
  • expression in
  • production in
  • phosphorylation in
  • function
  • fusion
  • accumulation in
  • synaptic transmission
  • recruitment
  • quantity
  • maturation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • soluble fraction
  • membrane fraction
  • synaptic vesicle membrane
  • glutaminergic synapse
  • Cytoplasm
  • presynaptic regions
  • perinuclear region
  • microvesicles
  • cellular membrane
  • manchette
  • cytosol
  • acrosome
  • synaptic vesicles
  • growth cone
  • synaptosomes
  • synapse
  • cytoplasmic vesicles
  • secretory granules
  • perikaryon
  • dendrites
  • synaptic vesicle fractions
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Snapin gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • anterograde axon cargo transport
  • intracellular protein transport
  • organelle transport along microtubule
  • synaptic vesicle transport
  • negative regulation of neuron projection development
  • regulation of protein binding
  • protein maturation
  • synaptic vesicle exocytosis
  • lysosome organization
  • neuron projection development
  • lysosomal lumen acidification
  • endosome to lysosome transport
  • neurotransmitter secretion
  • lysosome localization
  • neuron homeostasis
  • protein complex localization
  • melanosome organization
  • regulation of endosome size
  • terminal button organization
  • synaptic vesicle fusion to presynaptic membrane
  • regulation of synaptic vesicle exocytosis
  • synaptic vesicle maturation
  • retrograde axon cargo transport
  • anterograde synaptic vesicle transport

Cellular Component

Where in the cell the gene product is active
  • BLOC-1 complex
  • perinuclear region of cytoplasm
  • secretory granule
  • acrosomal vesicle
  • synaptic vesicle
  • cytosol
  • Golgi membrane
  • synaptic vesicle membrane
  • synapse
  • manchette

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • SNARE binding

Gene-Specific Assays for Results You Can Trust

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