Arid5a Gene Summary [Rat]

Predicted to enable several functions, including RNA binding activity; nuclear receptor binding activity; and transcription corepressor activity. Predicted to be involved in several processes, including cellular response to estrogen stimulus; positive regulation of T-helper 17 type immune response; and positive regulation of gene expression. Predicted to act upstream of or within chondrocyte differentiation; positive regulation of protein acetylation; and positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleolus and nucleoplasm. Predicted to be part of transcription regulator complex. Predicted to be active in nucleus. Orthologous to human ARID5A (AT-rich interaction domain 5A). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Arid5a
Official Name
AT-rich interaction domain 5A [Source:RGD Symbol;Acc:1311041]
Ensembl ID
ENSRNOG00000015382
Bio databases IDs NCBI: 316327 Ensembl: ENSRNOG00000015382
Aliases AT-rich interaction domain 5A
Synonyms AT-rich interaction domain 5A, D430024K22Rik, LOC100132284, LOC100996535, MRF-1, RP11-363D14
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Arid5a often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • transcription regulator
  • transcription co-repressor
  • androgen receptor binding
  • transcription factor binding
  • chromatin binding
  • estrogen receptor binding
  • protein binding
  • thyroid hormone receptor binding
  • sequence-specific DNA binding
  • identical protein binding
  • ARID/BRIGHT DNA binding domain
  • DNA binding
  • RNA binding
  • mRNA 3' UTR binding
  • retinoid X receptor binding
  • ARID/BRIGHT DNA binding domain family

Pathways

Biological processes and signaling networks where the Arid5a gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • peripheral arterial disease
  • obesity
  • acute myeloid leukemia
  • focal segmental glomerulosclerosis
  • lupus erythematosus
  • autoimmune glomerulonephritis
  • experimental autoimmune encephalomyelitis
  • ANCA disease
  • endotoxin shock response
  • membranous glomerulonephritis
regulated by
role in cell
  • expression in
  • activation in
  • acetylation in
  • differentiation
  • number
  • cellular infiltration by
  • stabilization in
  • transactivation in
  • transcription in
  • response

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Cytoplasm
  • granules
  • nucleoplasm
  • nucleoli

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Arid5a gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • chondrocyte differentiation
  • positive regulation of transcription from RNA polymerase II promoter
  • cellular response to estrogen stimulus
  • regulation of transcription from RNA polymerase II promoter
  • negative regulation of transcription from RNA polymerase II promoter
  • positive regulation of T-helper 17 type immune response
  • cellular response to lipopolysaccharide
  • negative regulation of transcription, DNA-dependent
  • innate immune response
  • positive regulation of interferon-gamma production
  • positive regulation of interleukin-17 production
  • positive regulation of tumor necrosis factor production
  • positive regulation of T-helper 1 cell cytokine production
  • positive regulation of interleukin-6 production

Cellular Component

Where in the cell the gene product is active
  • transcription factor complex
  • nucleus
  • nucleolus
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • identical protein binding
  • transcription regulatory region sequence-specific DNA binding
  • sequence-specific DNA binding
  • chromatin binding
  • transcription factor binding
  • retinoid X receptor binding
  • thyroid hormone receptor binding
  • DNA binding
  • protein binding
  • androgen receptor binding
  • transcription corepressor activity
  • RNA stem-loop binding
  • estrogen receptor binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.