Hnrnpl Gene Summary [Rat]

Heterogeneous nuclear RNAs (hnRNAs) which include mRNA precursors and mature mRNAs are associated with specific proteins to form heterogenous ribonucleoprotein (hnRNP) complexes. Heterogeneous nuclear ribonucleoprotein L is among the proteins that are stably associated with hnRNP complexes and along with other hnRNP proteins is likely to play a major role in the formation, packaging, processing, and function of mRNA. Heterogeneous nuclear ribonucleoprotein L is present in the nucleoplasm as part of the HNRP complex. HNRP proteins have also been identified outside of the nucleoplasm. Exchange of hnRNP for mRNA-binding proteins accompanies transport of mRNA from the nucleus to the cytoplasm. Since HNRP proteins have been shown to shuttle between the nucleus and the cytoplasm, it is possible that they also have cytoplasmic functions. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
Hnrnpl
Official Name
heterogeneous nuclear ribonucleoprotein L [Source:RGD Symbol;Acc:71059]
Ensembl ID
ENSRNOG00000020235
Bio databases IDs NCBI: 80846 Ensembl: ENSRNOG00000020235
Aliases heterogeneous nuclear ribonucleoprotein L
Synonyms C79783, D830027H13Rik, heterogeneous nuclear ribonucleoprotein L, HNRPL, L-protein, P/OKcl.14, Ribonucleoprotein l
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Hnrnpl often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA recognition motif (RRM) superfamily
  • RRM-like domain
  • hnRNP-L/PTB/hephaestus splicing factor family
  • mRNA 3' UTR binding
  • double-stranded DNA binding
  • RNA recognition motif
  • nucleic acid binding
  • mRNA binding
  • protein binding
  • sequence-specific DNA binding
  • RNA binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • prostate cancer
regulated by
regulates
role in cell
  • proliferation
  • differentiation
  • growth
  • expression in
  • migration
  • phosphorylation in
  • cell movement
  • response by
  • alternative splicing by
  • splicing by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • ribonucleoprotein granule
  • Cytoplasm
  • cell surface
  • perinuclear region
  • ribosome
  • polysomes
  • nucleoplasm
  • interchromatin granule clusters
  • pronucleus
  • synapse
  • chromatin
  • paraspeckle-like structures
  • cytoplasmic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Hnrnpl gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of transcription, DNA-dependent
  • regulation of alternative nuclear mRNA splicing, via spliceosome
  • regulation of RNA splicing
  • RNA processing
  • mRNA processing

Cellular Component

Where in the cell the gene product is active
  • ribonucleoprotein granule
  • nucleus
  • extracellular vesicular exosome
  • cytoplasm
  • membrane
  • chromatin
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • pre-mRNA intronic binding
  • RNA binding
  • protein binding
  • transcription regulatory region sequence-specific DNA binding
  • mRNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.