SENP6 Gene Summary [Human]

Ubiquitin-like molecules (UBLs), such as SUMO1 (UBL1; MIM 601912), are structurally related to ubiquitin (MIM 191339) and can be ligated to target proteins in a similar manner as ubiquitin. However, covalent attachment of UBLs does not result in degradation of the modified proteins. SUMO1 modification is implicated in the targeting of RANGAP1 (MIM 602362) to the nuclear pore complex, as well as in stabilization of I-kappa-B-alpha (NFKBIA; MIM 164008) from degradation by the 26S proteasome. Like ubiquitin, UBLs are synthesized as precursor proteins, with 1 or more amino acids following the C-terminal glycine-glycine residues of the mature UBL protein. Thus, the tail sequences of the UBL precursors need to be removed by UBL-specific proteases, such as SENP6, prior to their conjugation to target proteins (Kim et al., 2000 [PubMed 10799485]). SENPs also display isopeptidase activity for deconjugation of SUMO-conjugated substrates (Lima and Reverter, 2008 [PubMed 18799455]).[supplied by OMIM, Jun 2009]

Details

Type
Protein Coding
Official Symbol
SENP6
Official Name
SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
Ensembl ID
ENSG00000112701
Bio databases IDs NCBI: 26054 Ensembl: ENSG00000112701
Aliases SUMO specific peptidase 6
Synonyms 2810017C20Rik, E130319N12Rik, FKSG6, mKIAA0797, SSP1, SUMO/sentrin specific peptidase 6, SUMO specific peptidase 6, SUSP1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SENP6 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • cysteine endopeptidase
  • catalytic domain
  • peptidase
  • protein binding
  • ubiquitin-like-specific protease

Pathways

Biological processes and signaling networks where the SENP6 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • migraines
  • epithelial cancer
  • liver cancer
  • osteoarthritis
  • hepatocellular carcinoma
  • cutaneous lupus erythematosus
regulated by
role in cell
  • expression in
  • activation in
  • quantity
  • accumulation in
  • size
  • assembly
  • sumoylation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • cytosol
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SENP6 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of kinetochore assembly
  • regulation of spindle assembly
  • protein sumoylation
  • protein desumoylation
  • proteolysis
  • protein modification by small protein removal

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytoplasm
  • cytosol
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • SUMO-specific endopeptidase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.