SPTBN1 Gene Summary [Human]

Spectrin is an actin crosslinking and molecular scaffold protein that links the plasma membrane to the actin cytoskeleton, and functions in the determination of cell shape, arrangement of transmembrane proteins, and organization of organelles. It is composed of two antiparallel dimers of alpha- and beta- subunits. This gene is one member of a family of beta-spectrin genes. The encoded protein contains an N-terminal actin-binding domain, and 17 spectrin repeats which are involved in dimer formation. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
SPTBN1
Official Name
spectrin beta, non-erythrocytic 1 [Source:HGNC Symbol;Acc:HGNC:11275]
Ensembl ID
ENSG00000115306
Bio databases IDs NCBI: 6711 Ensembl: ENSG00000115306
Aliases spectrin beta, non-erythrocytic 1, Fodrin beta chain, Beta-II spectrin
Synonyms 9930031C03Rik, AL033301, beta-Fodrin, beta II SPECTRIN, betaSpII, DDISBA, ELF, elf1, ELF3, HEL102, mKIAA4049, SPECTRIN beta1, Spectrin Beta2, spectrin beta, non-erythrocytic 1, spectrin, beta, non-erythrocytic 1, spectrin β, non-erythrocytic 1, spectrin, β, non-erythrocytic 1, Spnb1, SPNB2, SPTB2, β-Fodrin, β II SPECTRIN
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SPTBN1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • SPEC
  • Calponin homology domain
  • enzyme binding
  • protein binding
  • Pleckstrin homology-like domain
  • chromosome segregation protein SMC, common bacterial type
  • Spectrin repeats
  • triple helical domain
  • actin-binding domain
  • ankyrin binding domain
  • binding protein
  • two helical domain
  • structural constituent of cytoskeleton
  • ankyrin binding
  • membrane association domain 1
  • actin binding
  • Spectrin repeat
  • PH domain
  • calponin homology (CH) domain superfamily
  • cysteine-histidine rich domain

Pathways

Biological processes and signaling networks where the SPTBN1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • inguinal hernia
  • epithelial neoplasia
  • benign neoplasia
  • hereditary disorder
  • epithelial thyroid cancer
  • thyroid cancer
  • epithelial cancer
  • head and neck cancer
  • endocrine cancer
regulates
role in cell
  • expression in
  • apoptosis
  • proliferation
  • quantity
  • growth
  • organization
  • assembly
  • outgrowth
  • disorganization
  • colony formation by

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • detergent resistant lipid raft fraction
  • glutaminergic synapse
  • cortical cytoskeleton
  • cytoskeleton
  • Cytoplasm
  • cell surface
  • cell periphery
  • intracellular space
  • apical compartment
  • somatodendritic region
  • postsynaptic region
  • cellular membrane
  • cell cortex
  • Nucleus
  • actin bundles
  • cell-cell contacts
  • sarcomere
  • demarcation membrane systems
  • cytosol
  • basolateral membrane
  • sinusoidal membrane
  • lateral plasma membrane
  • nucleoli
  • axonal membrane
  • paranodes
  • juxtaparanodes
  • cuticular plate
  • membrane rafts
  • membrane processes
  • perikaryon
  • axons
  • dendrites
  • postsynaptic density

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SPTBN1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • plasma membrane organization
  • central nervous system development
  • actin filament capping
  • cytokinesis after mitosis
  • membrane assembly
  • Golgi to plasma membrane protein transport
  • central nervous system formation
  • regulation of SMAD protein import into nucleus
  • actin cytoskeleton organization
  • protein localization in plasma membrane
  • positive regulation of interleukin-2 production

Cellular Component

Where in the cell the gene product is active
  • postsynaptic density
  • nucleolus
  • cell projection
  • plasma membrane
  • extracellular vesicular exosome
  • cytoplasm
  • cell junction
  • cytosol
  • axolemma
  • M band
  • cuticular plate
  • spectrin
  • cortical actin cytoskeleton
  • spectrin-associated cytoskeleton

Molecular Function

What the gene product does at the molecular level
  • actin filament binding
  • calmodulin binding
  • protein binding
  • RNA binding
  • actin binding
  • ankyrin binding
  • GTPase binding
  • cadherin binding
  • structural constituent of cytoskeleton
  • phospholipid binding

Gene-Specific Assays for Results You Can Trust

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