RPE65 Gene Summary [Human]

The protein encoded by this gene is a component of the vitamin A visual cycle of the retina which supplies the 11-cis retinal chromophore of the photoreceptors opsin visual pigments. It is a member of the carotenoid cleavage oxygenase superfamily. All members of this superfamily are non-heme iron oxygenases with a seven-bladed propeller fold and oxidatively cleave carotenoid carbon:carbon double bonds. However, the protein encoded by this gene has acquired a divergent function that involves the concerted O-alkyl ester cleavage of its all-trans retinyl ester substrate and all-trans to 11-cis double bond isomerization of the retinyl moiety. As such, it performs the essential enzymatic isomerization step in the synthesis of 11-cis retinal. Mutations in this gene are associated with early-onset severe blinding disorders such as Leber congenital. [provided by RefSeq, Oct 2017]

Details

Type
Protein Coding
Official Symbol
RPE65
Official Name
retinoid isomerohydrolase RPE65 [Source:HGNC Symbol;Acc:HGNC:10294]
Ensembl ID
ENSG00000116745
Bio databases IDs NCBI: 6121 Ensembl: ENSG00000116745
Aliases retinoid isomerohydrolase RPE65, BCO family, member 3, retinol isomerase, all-trans-retinyl-palmitate hydrolase
Synonyms A930029L06Rik, BCO3, LCA2, LOC100361609, Mord1, mRPE65, p63, rd12, retinal pigment epithelium 65, retinoid isomerohydrolase RPE65, RP20, sRPE65
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human RPE65 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • carboxylic ester hydrolase
  • phospholipid binding
  • Retinal pigment epithelial membrane protein
  • binding protein
  • isomerase
  • enzyme
  • protein binding
  • retinyl-palmitate esterase
  • All-trans-retinyl-palmitate hydrolase

Pathways

Biological processes and signaling networks where the RPE65 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • retinal dystrophy
  • Leber congenital amaurosis type 1
  • retinitis pigmentosa type 20
  • RPE65-related recessive retinopathy
  • hereditary disorder
  • Leber congenital amaurosis type 2
  • autosomal recessive childhood-onset severe retinal dystrophy
  • glaucoma
  • Leber congenital amaurosis
  • RPE65-related disorder
regulated by
regulates
  • FOS
  • retinyl ester
  • 11-cis-retinal
  • OPN1MW
  • PTPN1
  • opsin
  • 9-cis-retinal
  • 11-cis A1 taurine
  • INSR
  • all-trans-retinyl esters
role in cell
  • response
  • degradation in
  • accumulation
  • degeneration
  • light sensitivity
  • abnormal morphology
  • function
  • electrophysiology
  • disorganization
  • density

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • membrane fraction
  • cellular membrane
  • Nucleus
  • Plasma Membrane
  • endoplasmic reticulum membrane
  • perikaryon
  • cone outer segments
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human RPE65 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • retina homeostasis
  • detection of light stimulus involved in visual perception
  • retinoid metabolic process
  • neural retina development
  • retinol metabolic process
  • retinal metabolic process
  • circadian rhythm
  • visual perception
  • vitamin A metabolic process

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum membrane
  • nucleus
  • membrane
  • cell body
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity
  • phosphatidylserine binding
  • all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming activity
  • beta-carotene 15,15'-monooxygenase activity
  • retinol isomerase activity
  • metal ion binding
  • phosphatidylcholine binding
  • isomerase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.