ACTL6A Gene Summary [Human]

This gene encodes a family member of actin-related proteins (ARPs), which share significant amino acid sequence identity to conventional actins. Both actins and ARPs have an actin fold, which is an ATP-binding cleft, as a common feature. The ARPs are involved in diverse cellular processes, including vesicular transport, spindle orientation, nuclear migration and chromatin remodeling. This gene encodes a 53 kDa subunit protein of the BAF (BRG1/brm-associated factor) complex in mammals, which is functionally related to SWI/SNF complex in S. cerevisiae and Drosophila; the latter is thought to facilitate transcriptional activation of specific genes by antagonizing chromatin-mediated transcriptional repression. Together with beta-actin, it is required for maximal ATPase activity of BRG1, and for the association of the BAF complex with chromatin/matrix. Three transcript variants that encode two different protein isoforms have been described. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
ACTL6A
Official Name
actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
Ensembl ID
ENSG00000136518
Bio databases IDs NCBI: 86 Ensembl: ENSG00000136518
Aliases actin like 6A, BAF complex 53 kDa subunit, BRG1-associated factor 53A, actin-related protein 4, INO80 complex subunit K
Synonyms 2810432C06Rik, Actin-like 6a, ACTL6, ARP4, ARPN-BETA, ARPN-β, Baf53, BAF53A, INO80K, RGD1307747, SMARCN1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ACTL6A often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Actin
  • chromatin binding
  • protein binding
  • ASKHA_ATPase-like

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • lung cancer
  • small cell lung cancer
  • BAFopathy
  • systemic sclerosis
  • rheumatoid arthritis
  • aplastic anemia
  • bone marrow failure
  • gastric cancer
regulated by
regulates
role in cell
  • expression in
  • proliferation
  • accumulation in
  • survival
  • G2/M phase
  • cell cycle progression
  • ferroptosis
  • cellularity
  • disruption
  • compaction

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • interchromatin granule cluster fractions
  • nuclear fraction
  • Cytoplasm
  • Plasma Membrane
  • nucleosomes
  • nucleoplasm
  • nuclear matrix

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ACTL6A gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • DNA repair
  • regulation of mitotic metaphase/anaphase transition
  • regulation of chromosome organization
  • regulation of DNA strand elongation
  • regulation of DNA repair
  • positive regulation of cell proliferation
  • nervous system development
  • positive regulation of myoblast differentiation
  • regulation of nucleotide-excision repair
  • spinal cord development
  • chromatin remodeling
  • negative regulation of cell differentiation
  • regulation of double-strand break repair
  • positive regulation of transcription, DNA-dependent
  • neural retina development
  • blastocyst formation
  • regulation of cell cycle
  • positive regulation of DNA repair
  • signal transduction
  • DNA recombination
  • regulation of embryonic development
  • regulation of transcription, DNA-dependent
  • telomere maintenance
  • regulation of apoptotic process
  • regulation of DNA replication
  • positive regulation of cell differentiation
  • regulation of transcription from RNA polymerase II promoter
  • positive regulation of T cell differentiation
  • regulation of G1/S transition of mitotic cell cycle
  • positive regulation of double-strand break repair
  • regulation of G0 to G1 transition

Cellular Component

Where in the cell the gene product is active
  • SWI/SNF complex
  • NuA4 histone acetyltransferase complex
  • brahma complex
  • kinetochore
  • nucleosome
  • chromatin
  • plasma membrane
  • nucleoplasm
  • nucleus
  • npBAF complex
  • nuclear matrix
  • macromolecular complex
  • Ino80 complex
  • RSC complex

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • transcription coactivator activity
  • nucleosomal DNA binding
  • chromatin binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.