Itga6 Gene Summary [Mouse]

This gene encodes a protein that is a member of the integrin superfamily. Integrins are transmembrane receptors involved cell adhesion and signaling, and they are subdivided based on the heterodimer formation of alpha and beta chains. This protein has been shown to heterodimerize with beta 4 to bind laminin and to form the main component of hemidesmosomes, which mediate attachment of epithelia to basement membranes. In mouse, deficiency of this gene is associated with absence of hemidesmosomes, severe skin blistering, and early post-natal death. In humans mutations of this gene are associated with epidermolysis bullosa. Alternative splicing results in multiple transcript variants that encode different protein isoforms. [provided by RefSeq, May 2013]

Details

Type
Processed Transcript
Official Symbol
Itga6
Official Name
integrin alpha 6 [Source:MGI Symbol;Acc:MGI:96605]
Ensembl ID
ENSMUSG00000027111
Bio databases IDs NCBI: 16403 Ensembl: ENSMUSG00000027111
Aliases integrin alpha 6
Synonyms 5033401O05Rik, CD49f, integrin alpha 6, integrin subunit alpha 6, integrin subunit α 6, Integrin-α 6, ITGA6A, ITGA6B, ITG alpha6, JEB6, VLA-6
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Itga6 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Integrin alpha cytoplasmic region
  • extracellular domain
  • insulin-like growth factor binding
  • protein binding
  • FG-GAP-like repeat
  • Integrin alpha (beta-propellor repeats)
  • binding protein
  • Integrin alpha
  • cytoplasmic domain
  • laminin binding
  • intracellular domain
  • cytosolic tail domain
  • FG-GAP repeat
  • PDZ binding motif
  • transmembrane receptor
  • growth factor binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • tumorigenesis
  • colon cancer
  • metastasis
  • cancer
  • prostate cancer
  • oral squamous cell carcinoma
  • squamous cell cancer of the oral cavity
  • prostatic carcinoma
  • epithelial cancer
regulated by
  • EGF
  • tetradecanoylphorbol acetate
  • PI3K (complex)
  • MYC
  • SOS
  • KRAS
  • TIAM1
  • RAB11
  • dexamethasone
  • insulin
regulates
role in cell
  • cell death
  • apoptosis
  • expression in
  • proliferation
  • production in
  • cell viability
  • activation in
  • phosphorylation in
  • formation
  • differentiation

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • hemidesmosome-like structure
  • extracellular vesicles
  • Cytoplasm
  • cell surface
  • cell borders
  • cell periphery
  • basal compartment
  • membrane surface
  • cellular membrane
  • retraction fibers
  • intercellular junctions
  • hemidesmosomes
  • basal cell surfaces
  • basolateral cell surfaces
  • plasma membrane extracellular face
  • basolateral membrane
  • basal membrane
  • lateral plasma membrane
  • zona pellucida
  • abaxonal membranes
  • perinuclear vesicles
  • filopodia
  • cell membrane leading edge
  • filopodial shafts
  • perikaryon
  • exosomes
  • cell-cell adherens junctions
  • basement membrane
  • lamellipodia

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Itga6 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • positive regulation of phosphorylation
  • cell-matrix adhesion
  • cell-substrate junction assembly
  • skin morphogenesis
  • positive regulation of transcription from RNA polymerase II promoter
  • positive regulation of GTPase activity
  • integrin-mediated signaling pathway
  • cell adhesion mediated by integrin
  • positive regulation of apoptotic process
  • negative regulation of extrinsic apoptotic signaling pathway
  • nail development
  • positive regulation of neuron projection development
  • leukocyte migration
  • positive regulation of cell-substrate adhesion
  • ectodermal cell differentiation
  • cell-substrate adhesion
  • cellular response to organic cyclic compound
  • positive regulation of cell migration

Cellular Component

Where in the cell the gene product is active
  • adherens junction
  • focal adhesion
  • external side of plasma membrane
  • filopodium
  • alpha6-beta4 integrin complex
  • alpha6-beta1 integrin complex
  • integrin complex
  • plasma membrane
  • cell surface

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • neuregulin binding
  • metal ion binding
  • cadherin binding
  • integrin binding
  • laminin binding
  • insulin-like growth factor I binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.