Usp9x Gene Summary [Mouse]

Enables cysteine-type deubiquitinase activity; cysteine-type endopeptidase activity; and ubiquitin protein ligase binding activity. Involved in generation of neurons; protein deubiquitination involved in ubiquitin-dependent protein catabolic process; and regulation of postsynapse assembly. Acts upstream of or within several processes, including cellular response to transforming growth factor beta stimulus; in utero embryonic development; and nervous system development. Located in apical part of cell and cytoplasm. Is active in postsynapse. Is expressed in several structures, including central nervous system; eye; genitourinary system; limb interdigital region; and lung. Human ortholog(s) of this gene implicated in female-restricted syndromic X-linked intellectual disability 99 and non-syndromic X-linked intellectual disability 99. Orthologous to human USP9X (ubiquitin specific peptidase 9 X-linked). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Usp9x
Official Name
ubiquitin specific peptidase 9, X chromosome [Source:MGI Symbol;Acc:MGI:894681]
Ensembl ID
ENSMUSG00000031010
Bio databases IDs NCBI: 22284 Ensembl: ENSMUSG00000031010
Aliases ubiquitin specific peptidase 9, X chromosome
Synonyms 5730589N07Rik, DFFRX, FAF, Fafl, FAF-X, FAM, hFAM, MRX99, MRXS99F, RGD1560056, ubiquitin specific peptidase 9, X chromosome, ubiquitin specific peptidase 9 X-linked, ubiquitin specific peptidase 9, X-linked, XLID99
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Usp9x often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Domain of unknown function (DUF3517)
  • ubiquitin protein ligase binding
  • SMAD binding
  • catalytic domain
  • peptidase
  • protein binding
  • Peptidase_C19
  • ubiquitin thiolesterase
  • cysteine-type peptidase
  • cysteine endopeptidase
  • Ubiquitin carboxyl-terminal hydrolase
  • ubiquitin-specific protease
  • deubiquitinating catalytic domain
  • ubiquitin-like-specific protease

Pathways

Biological processes and signaling networks where the Usp9x gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • precursor B-cell acute lymphoblastic leukemia
  • metastasis
  • neoplasia
  • COVID-19
  • hereditary disorder
  • female-restricted X-linked syndromic mental retardation-99
  • renal clear cell adenocarcinoma
  • renal clear cell cancer
  • severe mental retardation
  • X-linked mental retardation type 99
regulated by
regulates
role in cell
  • quantity
  • expression in
  • apoptosis
  • proliferation
  • growth
  • phosphorylation in
  • replication in
  • survival
  • migration
  • clonogenicity

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • centriolar satellite
  • Cytoplasm
  • cilia
  • apical compartment
  • perinuclear region
  • postsynaptic region
  • Nucleus
  • centrosome
  • Golgi Apparatus
  • cell-cell contacts
  • cytosol
  • apical membrane
  • basal membrane
  • growth cone
  • cytoplasmic vesicles
  • plasma

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Usp9x gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • female gamete generation
  • protein deubiquitination
  • protein deubiquitination involved in ubiquitin-dependent protein catabolic process
  • positive regulation of protein binding
  • monoubiquitinated protein deubiquitination
  • cilium morphogenesis
  • protein localization
  • transforming growth factor beta receptor signaling pathway
  • chromosome segregation
  • regulation of circadian rhythm
  • negative regulation of transcription from RNA polymerase II promoter
  • cell division
  • DNA dealkylation involved in DNA repair
  • neuron migration
  • rhythmic process
  • axon extension
  • BMP signaling pathway
  • protein import into peroxisome matrix, receptor recycling
  • protein stabilization
  • cell migration
  • protein K63-linked deubiquitination
  • protein ubiquitination
  • negative regulation of proteasomal ubiquitin-dependent protein catabolic process

Cellular Component

Where in the cell the gene product is active
  • growth cone
  • nucleus
  • centrosome
  • cytoplasm
  • membrane
  • cilium
  • cytosol

Molecular Function

What the gene product does at the molecular level
  • ubiquitin-specific protease activity
  • protein binding
  • cysteine-type endopeptidase activity
  • co-SMAD binding
  • cysteine-type peptidase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.