Plxnb1 Gene Summary [Mouse]

Enables GTPase activating protein binding activity and semaphorin receptor activity. Involved in several processes, including negative regulation of osteoblast proliferation; nervous system development; and positive regulation of intracellular signal transduction. Acts upstream of or within positive regulation of axonogenesis. Part of semaphorin receptor complex. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; respiratory system; and sensory organ. Orthologous to human PLXNB1 (plexin B1). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Plxnb1
Official Name
plexin B1 [Source:MGI Symbol;Acc:MGI:2154238]
Ensembl ID
ENSMUSG00000053646
Bio databases IDs NCBI: 235611 Ensembl: ENSMUSG00000053646
Aliases plexin B1
Synonyms 2900002G15Rik, LOC102555419, mKIAA0407, PLEXIN-B1, PLXN5, SEP
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Plxnb1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • extracellular domain
  • Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins
  • Plexin repeat
  • IPT
  • Plexin cytoplasmic RasGAP domain
  • GTPase activator
  • protein binding
  • GTPase Activating Protein domain
  • TIG domain
  • Ras GTPase Activating Domain
  • semaphorin domain
  • Plexin cytoplasmic RhoGTPase-binding domain
  • semaphorin receptor binding
  • cytoplasmic domain
  • TIG domain found in plexin
  • IPT/TIG domain
  • intracellular domain
  • semaphorin receptor
  • tail domain
  • PDZ binding motif
  • plexin/semaphorin/integrin domain
  • Sema domain
  • transmembrane receptor
  • The Sema domain, a protein interacting module, of semaphorins and plexins

Pathways

Biological processes and signaling networks where the Plxnb1 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • cancer
  • epithelial neoplasia
  • primary prostate cancer
  • liver cancer
  • epithelial cancer
  • hepatocellular carcinoma
  • basal cell skin cancer
  • skin neoplasia
  • skin cancer
  • osteosclerosis
regulated by
regulates
role in cell
  • expression in
  • phosphorylation in
  • invasion
  • proliferation
  • migration
  • growth
  • development
  • formation
  • organization
  • assembly

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • glutaminergic synapse
  • cell surface
  • Extracellular Space
  • cellular membrane
  • postsynaptic membrane
  • perikaryon

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Plxnb1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of cell shape
  • positive regulation of Rho protein signal transduction
  • negative regulation of cell adhesion
  • neuron projection morphogenesis
  • positive regulation of GTPase activity
  • ossification involved in bone maturation
  • positive regulation of axonogenesis
  • regulation of cytoskeleton organization
  • regulation of GTPase activity
  • regulation of cell migration
  • cell migration
  • intracellular signal transduction
  • positive regulation of protein kinase B signaling cascade
  • negative regulation of osteoblast proliferation
  • semaphorin-plexin signaling pathway

Cellular Component

Where in the cell the gene product is active
  • semaphorin receptor complex
  • extracellular region
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • transmembrane signaling receptor activity
  • GTPase activator activity
  • semaphorin receptor activity
  • GTPase activating protein binding
  • semaphorin receptor binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.