S100a9 Gene Summary [Rat]

The protein encoded by this gene is a member of the S100 family of proteins containing 2 EF-hand calcium-binding motifs. S100 proteins are localized in the cytoplasm and/or nucleus of a wide range of cells, and involved in the regulation of a number of cellular processes such as cell cycle progression and differentiation. S100 genes include at least 13 members which are located as a cluster on chromosome 1q21. This protein may function in the inhibition of casein kinase and altered expression of this protein is associated with the disease cystic fibrosis. This antimicrobial protein exhibits antifungal and antibacterial activity. [provided by RefSeq, Nov 2014]

Details

Type
Protein Coding
Official Symbol
S100a9
Official Name
S100 calcium binding protein A9 [Source:RGD Symbol;Acc:620267]
Ensembl ID
ENSRNOG00000011483
Bio databases IDs NCBI: 94195 Ensembl: ENSRNOG00000011483
Aliases S100 calcium binding protein A9
Synonyms 60B8AG, BEE22, CAGB, calgranulin B, CFAG, CGLB, GAGB, L1AG, Leukocyte l1 complex heavy chain, LIAG, MAC387, MIF, MIGRATION INHIBITORY FACTOR RELATED protein 14, MRP14, NIF, P14, S100 calcium binding protein A9, S100 calcium binding protein A9 (calgranulin B)
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat S100a9 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • microtubule binding
  • EF-hand, calcium binding motif
  • S-100/ICaBP type calcium binding domain
  • zinc ion binding
  • EF-hand domain pair
  • calcium ion binding
  • EFh
  • arachidonic acid binding
  • protein binding
  • receptor binding

Pathways

Biological processes and signaling networks where the S100a9 gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • sepsis
  • esophageal squamous cell cancer
  • squamous cell cancer
  • epithelial neoplasia
  • rheumatoid arthritis
  • systemic lupus erythematosus
  • ischemic stroke
  • osteoarthritis
  • acne
  • idiopathic pulmonary fibrosis
regulated by
regulates
role in cell
  • quantity
  • expression in
  • proliferation
  • phagocytosis by
  • phosphorylation in
  • activation in
  • binding
  • migration
  • invasion by
  • acidification

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • gelatinase granule fractions
  • detergent resistant lipid raft fraction
  • cornified envelope
  • extracellular vesicles
  • secretory granule lumen
  • cytoskeleton
  • Extracellular Space
  • membrane surface
  • Plasma Membrane
  • cytosol
  • nucleoli
  • specific granules
  • chromatin
  • plasma

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat S100a9 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • regulation of respiratory burst involved in inflammatory response
  • astrocyte development
  • endothelial cell migration
  • positive regulation of NF-kappaB transcription factor activity
  • inflammatory response
  • positive regulation of cell growth
  • autophagy
  • apoptotic process
  • positive regulation of neuron projection development
  • neutrophil aggregation
  • activation of cysteine-type endopeptidase activity involved in apoptotic process
  • defense response to fungus
  • positive regulation of intrinsic apoptotic signaling pathway
  • peptidyl-cysteine S-nitrosylation
  • regulation of toll-like receptor signaling pathway
  • positive regulation of inflammatory response
  • cell-cell signaling
  • regulation of integrin biosynthetic process
  • defense response to bacterium
  • chronic inflammatory response
  • sequestering of zinc ion
  • leukocyte migration involved in inflammatory response
  • peptidyl-cysteine S-trans-nitrosylation
  • innate immune response
  • regulation of cytoskeleton organization
  • neutrophil chemotaxis
  • response to lipopolysaccharide
  • autocrine signaling
  • modification of morphology or physiology of other organism

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • extracellular space
  • extracellular vesicular exosome
  • cytoskeleton
  • cytoplasm
  • cytosol
  • secretory granule lumen
  • extracellular region
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • zinc ion binding
  • Toll-like receptor 4 binding
  • protein binding
  • antioxidant activity
  • calcium ion binding
  • calcium-dependent protein binding
  • arachidonic acid binding
  • RAGE receptor binding
  • microtubule binding

Gene-Specific Assays for Results You Can Trust

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