COL5A3 Gene Summary [Human]

This gene encodes an alpha chain for one of the low abundance fibrillar collagens. Fibrillar collagen molecules are trimers that can be composed of one or more types of alpha chains. Type V collagen is found in tissues containing type I collagen and appears to regulate the assembly of heterotypic fibers composed of both type I and type V collagen. This gene product is closely related to type XI collagen and it is possible that the collagen chains of types V and XI constitute a single collagen type with tissue-specific chain combinations. Mutations in this gene are thought to be responsible for the symptoms of a subset of patients with Ehlers-Danlos syndrome type III. Messages of several sizes can be detected in northern blots but sequence information cannot confirm the identity of the shorter messages. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
COL5A3
Official Name
collagen type V alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:14864]
Ensembl ID
ENSG00000080573
Bio databases IDs NCBI: 50509 Ensembl: ENSG00000080573
Aliases collagen type V alpha 3 chain
Synonyms Alpha4(v) collagen, collagen, type V, alpha 3, collagen type V alpha 3 chain, collagen, type V, α 3, collagen type V α 3 chain
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human COL5A3 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Fibrillar collagen C-terminal domain
  • binding protein
  • LamG
  • heparin binding domain
  • Collagen triple helix repeat (20 copies)
  • protein binding
  • structural molecule
  • basic domain
  • heparin binding

Pathways

Biological processes and signaling networks where the COL5A3 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
binds
disease
  • Dupuytren contracture
  • colorectal cancer
  • diabetic foot ulcer disorder
  • burn
  • cellulite of the buttocks
  • hyperglycemia
  • obesity
  • Peyronie disease
  • insulin resistance
  • weight loss
regulated by
regulates
role in cell
  • apoptosis
  • number
  • adhesion
  • cell spreading
  • organization
  • assembly
  • mass

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • endoplasmic reticulum lumen
  • extracellular matrix

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human COL5A3 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cell-matrix adhesion
  • extracellular matrix organization
  • collagen fibril organization
  • skin development

Cellular Component

Where in the cell the gene product is active
  • endoplasmic reticulum lumen
  • extracellular space
  • extracellular region
  • collagen type V

Molecular Function

What the gene product does at the molecular level
  • collagen binding
  • proteoglycan binding
  • extracellular matrix structural constituent conferring tensile strength
  • heparin binding
  • extracellular matrix structural constituent

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.