TNPO1 Gene Summary [Human]

This gene encodes the beta subunit of the karyopherin receptor complex which interacts with nuclear localization signals to target nuclear proteins to the nucleus. The karyopherin receptor complex is a heterodimer of an alpha subunit which recognizes the nuclear localization signal and a beta subunit which docks the complex at nucleoporins. Alternate splicing of this gene results in several transcript variants encoding different proteins. [provided by RefSeq, Jun 2018]

Details

Type
Protein Coding
Official Symbol
TNPO1
Official Name
transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
Ensembl ID
ENSG00000083312
Bio databases IDs NCBI: 3842 Ensembl: ENSG00000083312
Aliases transportin 1, importin 2
Synonyms AU021749, D13Ertd688e, Importin beta 2, Importin β 2, IPO2, KAP beta 2A, KAP β 2, KAP β 2A, KARYOPHERIN, Karyopherin beta-2, Karyopherin β-2, KPNB2, MIP, MIP1, TRANSPORTIN-1, TRN, TRN1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human TNPO1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • HEAT repeat
  • HEAT-like repeat
  • protein binding
  • Importin-beta N-terminal domain
  • HEAT repeats
  • nuclear localization sequence binding
  • transporter

Pathways

Biological processes and signaling networks where the TNPO1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • chronic obstructive pulmonary disease
  • atrial fibrillation
  • kidney stones
  • thrombocytopenia
  • urinary bladder stone
  • infection by Influenza A virus subtype H1N1
role in cell
  • josamycin sensitivity
  • innate immune response in
  • retention in
  • aggregation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • detergent resistant lipid raft fraction
  • Cytoplasm
  • cilia
  • cytosol
  • nucleoplasm
  • nucleoli
  • nuclear envelope

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human TNPO1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • protein import into nucleus

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • extracellular vesicular exosome
  • cytoplasm
  • cilium
  • cytosol

Molecular Function

What the gene product does at the molecular level
  • RNA binding
  • protein binding
  • small GTPase binding
  • nuclear localization sequence binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.