PTPRK Gene Summary [Human]

The protein encoded by this gene is a member of the protein tyrosine phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP possesses an extracellular region, a single transmembrane region, and two tandem catalytic domains, and thus represents a receptor-type PTP. The extracellular region contains a meprin-A5 antigen-PTP mu (MAM) domain, an Ig-like domain and four fibronectin type III-like repeats. This PTP was shown to mediate homophilic intercellular interaction, possibly through the interaction with beta- and gamma-catenin at adherens junctions. Expression of this gene was found to be stimulated by TGF-beta 1, which may be important for the inhibition of keratinocyte proliferation. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
PTPRK
Official Name
protein tyrosine phosphatase receptor type K [Source:HGNC Symbol;Acc:HGNC:9674]
Ensembl ID
ENSG00000152894
Bio databases IDs NCBI: 5796 Ensembl: ENSG00000152894
Aliases protein tyrosine phosphatase receptor type K
Synonyms protein tyrosine phosphatase receptor type K, protein tyrosine phosphatase, receptor type, K, PTPk, PTP-κ, Rptpk, R-PTP-kappa, R-PTP-κ
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human PTPRK often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • protein kinase binding
  • protein-tyrosine-phoshatase
  • beta-catenin binding
  • catalytic domain
  • immunoglobulin domain
  • Protein tyrosine phosphatase, catalytic domain
  • Immunoglobulin I-set domain
  • protein binding
  • Fibronectin type 3 domain
  • PTP_DSP_cys
  • phosphatase domain
  • Protein tyrosine phosphatase, catalytic domain motif
  • Protein tyrosine phosphatase, catalytic domain, undefined specificity
  • Protein-tyrosine phosphatase
  • Domain in meprin, A5, receptor protein tyrosine phosphatase mu (and others)
  • gamma-catenin binding
  • FN3
  • Immunoglobulin like
  • phosphatase
  • active site
  • MAM domain, meprin/A5/mu

Pathways

Biological processes and signaling networks where the PTPRK gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • asthma
  • allergic rhinitis
  • celiac disease
  • allergy
  • hearing loss
  • schizophrenia
  • generalized epilepsy
  • nasal type extranodal NK-/T-cell lymphoma
  • mature T-cell neoplasia
  • T-cell non-Hodgkin disease
regulated by
role in cell
  • phosphorylation in
  • survival
  • growth
  • proliferation
  • adhesion
  • migration
  • assembly
  • cell cycle progression
  • morphogenesis
  • invasiveness

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Plasma Membrane
  • cell junction
  • intracellular membrane-bounded organelle
  • cell surface
  • cellular membrane
  • Nucleus
  • intercellular junctions
  • photoreceptor outer segments
  • anchoring junction
  • cell membrane leading edge
  • perikaryon
  • axons
  • dendrites

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human PTPRK gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • protein localization at cell surface
  • signal transduction
  • negative regulation of cell proliferation
  • protein dephosphorylation
  • transforming growth factor beta receptor signaling pathway
  • negative regulation of cell cycle
  • cell adhesion
  • negative regulation of keratinocyte proliferation
  • negative regulation of transcription, DNA-dependent
  • cellular response to UV
  • focal adhesion assembly
  • cell migration
  • cellular response to reactive oxygen species
  • negative regulation of cell migration

Cellular Component

Where in the cell the gene product is active
  • adherens junction
  • cell-cell junction
  • intracellular membrane-bounded organelle
  • membrane
  • cell junction
  • leading edge membrane
  • plasma membrane
  • cell surface

Molecular Function

What the gene product does at the molecular level
  • protein kinase binding
  • gamma-catenin binding
  • protein binding
  • protein tyrosine phosphatase activity
  • beta-catenin binding
  • transmembrane receptor protein tyrosine phosphatase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.