Mnx1 Gene Summary [Mouse]

Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and sequence-specific double-stranded DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II and spinal cord motor neuron cell fate specification. Acts upstream of or within several processes, including diaphragm development; endocrine pancreas development; and nervous system development. Located in chromatin and nucleus. Is expressed in several structures, including central nervous system; genitourinary system; gut; lung epithelium; and notochord. Human ortholog(s) of this gene implicated in Currarino syndrome. Orthologous to human MNX1 (motor neuron and pancreas homeobox 1). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Mnx1
Official Name
motor neuron and pancreas homeobox 1 [Source:MGI Symbol;Acc:MGI:109160]
Ensembl ID
ENSMUSG00000001566
Bio databases IDs NCBI: 15285 Ensembl: ENSMUSG00000001566
Aliases motor neuron and pancreas homeobox 1
Synonyms HB9, HLXB9, HOXHB9, MNR2, motor neuron and pancreas homeobox 1, SCRA1
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Mnx1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • RNA polymerase II transcription factor activity, sequence-specific DNA binding
  • transcription regulator
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional repressor activity
  • double-stranded DNA binding
  • sequence-specific DNA binding
  • homeodomain

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
regulates
regulated by
disease
  • cancer
  • epithelial cancer
  • Duchenne muscular dystrophy
  • Currarino syndrome
  • breast cancer
  • invasive breast carcinoma
  • breast carcinoma
  • invasive breast cancer
  • urothelial bladder carcinoma
  • transitional cell bladder cancer
role in cell
  • migration
  • expression in
  • function
  • proliferation
  • apoptosis
  • growth
  • quantity
  • differentiation
  • abnormal morphology
  • guidance

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • cytosol
  • nucleoplasm
  • nucleoli
  • nuclear speckles
  • chromatin
  • perikaryon
  • axons
  • dendrites

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Mnx1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of transcription from RNA polymerase II promoter
  • central nervous system development
  • neuron projection morphogenesis
  • endocrine pancreas development
  • spinal cord motor neuron cell fate specification

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • cytosol
  • nucleolus
  • chromatin
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
  • sequence-specific DNA binding RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.