Gcnt1 Gene Summary [Mouse]

Enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity. Involved in core 2 O-glycan biosynthetic process and positive regulation of leukocyte tethering or rolling. Acts upstream of or within kidney morphogenesis and tissue morphogenesis. Predicted to be located in Golgi cisterna; extracellular space; and trans-Golgi network. Is expressed in several structures, including alimentary system; genitourinary system; nervous system; sensory organ; and skeleton. Orthologous to human GCNT1 (glucosaminyl (N-acetyl) transferase 1). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Gcnt1
Official Name
glucosaminyl (N-acetyl) transferase 1, core 2 [Source:MGI Symbol;Acc:MGI:95676]
Ensembl ID
ENSMUSG00000038843
Bio databases IDs NCBI: 14537 Ensembl: ENSMUSG00000038843
Aliases glucosaminyl (N-acetyl) transferase 1, core 2
Synonyms 5630400D21Rik, B130048E03, beta-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE, C2 GlcNAcT, C2GNT, C2GNT1, C2GNT-L, core 2 GlcNAc-T, core 2 β 1,6 n acetylglucosaminyltransferase leukocyte type, G6NT, glucosaminyl (N-acetyl) transferase 1, glucosaminyl (N-acetyl) transferase 1, core 2, IGnT, LOC635918, NACGT2, NAGCT2, β-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Gcnt1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Core-2/I-Branching enzyme
  • beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
  • enzyme
  • protein binding

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • chronic kidney disease
  • delayed hypersensitive reaction
  • preeclampsia
regulated by
regulates
role in cell
  • binding in
  • cell death
  • proliferation
  • quantity
  • differentiation
  • number
  • binding
  • abnormal morphology
  • cell rolling
  • migration

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • Extracellular Space
  • cellular membrane
  • medial face of the Golgi apparatus
  • cis face of the Golgi apparatus
  • Golgi membrane
  • trans Golgi network
  • Golgi cisternae

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Gcnt1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cell adhesion molecule production
  • tissue morphogenesis
  • response to insulin stimulus
  • kidney morphogenesis
  • glycoprotein biosynthetic process
  • leukocyte tethering or rolling
  • O-glycan processing
  • O-glycan processing, core 2

Cellular Component

Where in the cell the gene product is active
  • extracellular space
  • trans-Golgi network
  • membrane
  • Golgi membrane
  • Golgi cisterna

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.