Zic2 Gene Summary [Mouse]

Enables DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin DNA binding activity. Involved in several processes, including nervous system development; regulation of DNA-templated transcription; and visual perception. Acts upstream of or within several processes, including determination of left/right asymmetry in lateral mesoderm; nervous system development; and nodal signaling pathway. Located in cytoplasm and nucleus. Is expressed in several structures, including alimentary system; central nervous system; embryo ectoderm; embryo mesenchyme; and eye. Used to study holoprosencephaly 5 and schizophrenia. Human ortholog(s) of this gene implicated in holoprosencephaly and holoprosencephaly 5. Orthologous to human ZIC2 (Zic family member 2). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Zic2
Official Name
zinc finger protein of the cerebellum 2 [Source:MGI Symbol;Acc:MGI:106679]
Ensembl ID
ENSMUSG00000061524
Bio databases IDs NCBI: 22772 Ensembl: ENSMUSG00000061524
Aliases zinc finger protein of the cerebellum 2
Synonyms HPE5, KU, Zic family member 2, zinc finger protein of the cerebellum 2
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Zic2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Zinc finger, C2H2 type
  • Zic Opa-conserved domain
  • RNA polymerase II transcription regulatory region sequence-specific binding transcriptional activator activity
  • transcription regulator
  • nucleic acid binding
  • chromatin binding
  • protein binding
  • sequence-specific DNA binding
  • DNA binding
  • zinc finger
  • double-stranded DNA binding
  • Zinc-finger double domain
  • zinc finger domain
  • Zic proteins zinc finger domain
  • transcription factor activity

Pathways

Biological processes and signaling networks where the Zic2 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • rectum cancer
  • lung adenocarcinoma
  • lung adenocarcinoma formation
  • colon adenocarcinoma
  • hepatocellular carcinoma
  • liver cancer
  • epithelial cancer
  • nasopharyngeal carcinoma
  • nasopharyngeal cancer
regulated by
regulates
role in cell
  • expression in
  • proliferation
  • growth
  • colony formation by
  • sphere formation by
  • differentiation
  • accumulation
  • M2 polarization
  • migration
  • sphere-forming capacity

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • Cytoplasm
  • nucleoplasm
  • nuclear bodies

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Zic2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • central nervous system development
  • negative regulation of transcription, DNA-dependent
  • positive regulation of transcription, DNA-dependent
  • cell differentiation
  • brain development
  • visual perception
  • positive regulation of sequence-specific DNA binding transcription factor activity
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • nuclear body
  • cytoplasm
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • chromatin DNA binding
  • sequence-specific DNA binding transcription factor activity
  • metal ion binding
  • RNA polymerase II core promoter proximal region sequence-specific DNA binding
  • sequence-specific DNA binding RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.