Capn6 Gene Summary [Mouse]

Enables microtubule binding activity. Involved in microtubule bundle formation and regulation of cytoskeleton organization. Located in microtubule. Is expressed in several structures, including body cavity or lining; lung; metanephros; tongue; and trunk. Orthologous to human CAPN6 (calpain 6). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Capn6
Official Name
calpain 6 [Source:MGI Symbol;Acc:MGI:1100850]
Ensembl ID
ENSMUSG00000067276
Bio databases IDs NCBI: 12338 Ensembl: ENSMUSG00000067276
Aliases calpain 6
Synonyms calpain 6, CalpM, CANPX, CAPNX, DJ914P14.1
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Capn6 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • microtubule binding
  • Calpain family cysteine protease
  • calpain
  • peptidase
  • protein binding
  • Calpain_III
  • CysPc
  • Protein kinase C conserved region 2 (CalB)
  • C2 domain

Pathways

Biological processes and signaling networks where the Capn6 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • ulcerative colitis
  • infection by HIV-1
  • endometriosis
  • diabetic nephropathy
  • uterine leiomyoma
  • leiomyomatosis
  • leiomyoma
regulated by
  • COX4I1
  • allopurinol
  • dexamethasone
  • triamterene
  • cyclophosphamide
  • cisplatin
  • RUNX3
  • nitrofurantoin
  • TP63
  • indomethacin
role in cell
  • expression in
  • proliferation
  • apoptosis
  • formation
  • organization

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • perinuclear region
  • microtubules
  • spindle fibers

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Capn6 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • microtubule bundle formation
  • regulation of cytoskeleton organization
  • proteolysis

Cellular Component

Where in the cell the gene product is active
  • spindle microtubule
  • perinuclear region of cytoplasm
  • cytoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • calcium-dependent cysteine-type endopeptidase activity
  • microtubule binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.