CAPN6 Gene Summary [Human]

Calpains are ubiquitous, well-conserved family of calcium-dependent, cysteine proteases. The calpain proteins are heterodimers consisting of an invariant small subunit and variable large subunits. The large subunit possesses a cysteine protease domain, and both subunits possess calcium-binding domains. Calpains have been implicated in neurodegenerative processes, as their activation can be triggered by calcium influx and oxidative stress. The protein encoded by this gene is highly expressed in the placenta. Its C-terminal region lacks any homology to the calmodulin-like domain of other calpains. The protein lacks critical active site residues and thus is suggested to be proteolytically inactive. The protein may play a role in tumor formation by inhibiting apoptosis and promoting angiogenesis. [provided by RefSeq, Nov 2009]

Details

Type
Protein Coding
Official Symbol
CAPN6
Official Name
calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
Ensembl ID
ENSG00000077274
Bio databases IDs NCBI: 827 Ensembl: ENSG00000077274
Aliases calpain 6
Synonyms calpain 6, CalpM, CANPX, CAPNX, DJ914P14.1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human CAPN6 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • microtubule binding
  • Calpain family cysteine protease
  • calpain
  • peptidase
  • protein binding
  • Calpain_III
  • CysPc
  • Protein kinase C conserved region 2 (CalB)
  • C2 domain

Pathways

Biological processes and signaling networks where the CAPN6 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • ulcerative colitis
  • infection by HIV-1
  • endometriosis
  • diabetic nephropathy
  • uterine leiomyoma
  • leiomyomatosis
  • leiomyoma
regulated by
  • COX4I1
  • allopurinol
  • dexamethasone
  • triamterene
  • cyclophosphamide
  • cisplatin
  • RUNX3
  • nitrofurantoin
  • TP63
  • indomethacin
role in cell
  • expression in
  • proliferation
  • apoptosis
  • formation
  • organization

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • perinuclear region
  • microtubules
  • spindle fibers

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human CAPN6 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • microtubule bundle formation
  • regulation of cytoskeleton organization
  • proteolysis

Cellular Component

Where in the cell the gene product is active
  • spindle microtubule
  • perinuclear region of cytoplasm
  • cytoplasm

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • calcium-dependent cysteine-type endopeptidase activity
  • microtubule binding

Gene-Specific Assays for Results You Can Trust

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