TP53BP1 Gene Summary [Human]

This gene encodes a protein that functions in the DNA double-strand break repair pathway choice, promoting non-homologous end joining (NHEJ) pathways, and limiting homologous recombination. This protein plays multiple roles in the DNA damage response, including promoting checkpoint signaling following DNA damage, acting as a scaffold for recruitment of DNA damage response proteins to damaged chromatin, and promoting NHEJ pathways by limiting end resection following a double-strand break. These roles are also important during V(D)J recombination, class switch recombination and at unprotected telomeres. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Aug 2017]

Details

Type
Protein Coding
Official Symbol
TP53BP1
Official Name
tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
Ensembl ID
ENSG00000067369
Bio databases IDs NCBI: 7158 Ensembl: ENSG00000067369
Aliases tumor protein p53 binding protein 1
Synonyms 53BP1, LOC100502715, LOC688035, m53BP1, p202, p53BP1, TDRD30, transformation related protein 53 binding protein 1, Trp53bp1, tumor protein p53 binding protein 1, tumour protein p53 binding protein 1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human TP53BP1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • histone binding
  • BRCT
  • transcription regulator
  • transcription co-activator
  • protein binding activity, bridging
  • nuclear localization sequence
  • transcription cofactor
  • transcription factor binding
  • p53 binding
  • protein binding
  • sequence-specific DNA binding
  • kinetochore binding domain
  • telomeric DNA binding
  • damaged DNA binding
  • BRCA1 C Terminus (BRCT) domain
  • ATM phosphorylation site
  • breast cancer carboxy-terminal domain
  • Tudor domain superfamily
  • BRCT-like domain

Pathways

Biological processes and signaling networks where the TP53BP1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • cancer
  • psoriatic arthritis
  • cutaneous melanoma cancer
  • non-Hodgkin disease
  • metastasis
  • lung carcinoma process
  • lung cancer
  • T-cell non-Hodgkin disease
  • chromosomal instability
regulated by
regulates
role in cell
  • phosphorylation in
  • apoptosis
  • binding in
  • formation
  • formation in
  • proliferation
  • quantity
  • survival
  • growth
  • G2/M phase

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • Cytoplasm
  • nuclear foci
  • nucleoplasm
  • nuclear bodies
  • chromatin foci
  • kinetochores
  • telomeres
  • replication fork

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human TP53BP1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • DNA damage checkpoint
  • cellular response to X-ray
  • negative regulation of double-strand break repair via homologous recombination
  • positive regulation of transcription, DNA-dependent
  • positive regulation of isotype switching
  • protein homooligomerization
  • double-strand break repair via nonhomologous end joining
  • chromatin organization
  • positive regulation of transcription from RNA polymerase II promoter
  • response to DNA damage stimulus
  • positive regulation of sequence-specific DNA binding transcription factor activity

Cellular Component

Where in the cell the gene product is active
  • replication fork
  • chromosome, telomeric region
  • nucleus
  • site of double-strand break
  • nuclear body
  • cytoplasm
  • kinetochore
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • p53 binding
  • transcription cofactor activity
  • protein binding
  • telomeric DNA binding
  • histone binding
  • methylated histone residue binding
  • damaged DNA binding

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.