TAF6 Gene Summary [Human]

Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes one of the smaller subunits of TFIID that binds weakly to TBP but strongly to TAF1, the largest subunit of TFIID. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2010]

Details

Type
Protein Coding
Official Symbol
TAF6
Official Name
TATA-box binding protein associated factor 6 [Source:HGNC Symbol;Acc:HGNC:11540]
Ensembl ID
ENSG00000106290
Bio databases IDs NCBI: 6878 Ensembl: ENSG00000106290
Aliases TATA-box binding protein associated factor 6, TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80 kD, transcription initiation factor TFIID 70 kD subunit
Synonyms ALYUS, MGC:8964, p80, TAF2E, TAF70, TAF(II)70, TAFII-70, TAF(II)80, TAFII-80, TAFII85, TATA-box binding protein associated factor 6, Tata box binding protein-associated factor, tfiid subunit
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human TAF6 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • histone-fold domain
  • histone fold domain (HFD) superfamily
  • transcription regulator
  • aryl hydrocarbon receptor binding
  • TATA box binding protein associated factor (TAF)
  • C-terminal domain of TATA Binding Protein (TBP) Associated Factor 6 (TAF6)
  • protein binding
  • general RNA polymerase II transcription factor
  • TATA box binding protein associated factor
  • DNA binding

Pathways

Biological processes and signaling networks where the TAF6 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • hereditary disorder
  • syndromic mental retardation
  • breast cancer
  • Alazami-Yuan syndrome
  • Cornelia de Lange syndrome type 1
regulated by
  • dexamethasone
  • 3T3-L1 cells
  • benzo(a)pyrene
  • caspase
  • tretinoin
  • etoposide
  • garcinol
  • Human herpesvirus 1 strain KOS
  • ELOA
  • SP110
regulates
role in cell
  • expression in
  • apoptosis
  • proliferation
  • activation in
  • growth
  • cell cycle progression
  • JQ1-sensitivity
  • mitosis
  • G2 phase

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • cytosol
  • nucleoplasm

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human TAF6 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • mRNA transcription from RNA polymerase II promoter
  • RNA polymerase II transcriptional preinitiation complex assembly
  • positive regulation of transcription initiation from RNA polymerase II promoter
  • positive regulation of transcription, DNA-dependent
  • regulation of DNA repair
  • apoptotic process
  • negative regulation of cell cycle
  • transcription from RNA polymerase II promoter
  • transcription initiation, DNA-dependent
  • transcription initiation from RNA polymerase II promoter
  • regulation of transcription from RNA polymerase II promoter

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • transcription factor TFIID complex
  • SLIK (SAGA-like) complex
  • transcription factor TFTC complex
  • cytosol
  • macromolecular complex
  • SAGA complex
  • MLL1 complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • DNA binding
  • protein binding
  • transcription coactivator activity
  • protein heterodimerization activity
  • aryl hydrocarbon receptor binding
  • general RNA polymerase II transcription factor activity

Gene-Specific Assays for Results You Can Trust

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