ACTN4 Gene Summary [Human]

Alpha actinins belong to the spectrin gene superfamily which represents a diverse group of cytoskeletal proteins, including the alpha and beta spectrins and dystrophins. Alpha actinin is an actin-binding protein with multiple roles in different cell types. In nonmuscle cells, the cytoskeletal isoform is found along microfilament bundles and adherens-type junctions, where it is involved in binding actin to the membrane. In contrast, skeletal, cardiac, and smooth muscle isoforms are localized to the Z-disc and analogous dense bodies, where they help anchor the myofibrillar actin filaments. This gene encodes a nonmuscle, alpha actinin isoform which is concentrated in the cytoplasm, and thought to be involved in metastatic processes. Mutations in this gene have been associated with focal and segmental glomerulosclerosis. [provided by RefSeq, Jul 2008]

Details

Type
Retained Intron
Official Symbol
ACTN4
Official Name
actinin alpha 4 [Source:HGNC Symbol;Acc:HGNC:166]
Ensembl ID
ENSG00000130402
Bio databases IDs NCBI: 81 Ensembl: ENSG00000130402
Aliases actinin alpha 4
Synonyms ACTININ 4, actinin alpha 4, actinin, alpha 4, actinin α 4, Alpha actinin 4, FSGS, FSGS1, NON-MUSCLE alpha-ACTININ, NON-MUSCLE α-ACTININ, α-actinin-4
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human ACTN4 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • EF-Hand
  • transcription regulator
  • transcription co-activator
  • retinoic acid receptor binding
  • chromatin binding
  • Ca2+ insensitive EF hand
  • EFh_PI-PLC
  • EF-hand domain
  • structural constituent of cytoskeleton
  • actin binding
  • ion channel binding
  • SPEC
  • ubiquitin protein ligase binding
  • activation domain
  • ligand-dependent nuclear receptor interactor
  • Calponin homology domain
  • nucleic acid binding
  • EF-hand domain pair
  • EFh
  • protein binding
  • sequence-specific DNA binding
  • DNA binding
  • EF hand like domain
  • actin filament binding
  • Spectrin repeats
  • actin-binding domain
  • binding protein
  • double-stranded DNA binding
  • integrin binding
  • calponin homology (CH) domain superfamily
  • protein homodimerization
  • Spectrin repeat
  • structural molecule

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • COVID-19
  • neoplasia
  • metastasis
  • digestive system cancer
  • cancer
  • abdominal cancer
  • breast cancer
  • cervical squamous cell carcinoma
  • advanced cancer
  • liver cancer
regulated by
regulates
role in cell
  • binding
  • migration
  • expression in
  • apoptosis
  • morphology
  • activation in
  • formation
  • formation in
  • accumulation in
  • quantity

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • glutaminergic synapse
  • cytoplasmic face of endosomal membrane
  • cortical cytoskeleton
  • ruffle
  • cortical actin cytoskeleton
  • cytoskeleton
  • cilia
  • cell surface
  • Extracellular Space
  • cell periphery
  • perinuclear region
  • membrane surface
  • focal adhesions
  • actin cytoskeleton
  • Nucleus
  • Plasma Membrane
  • intercellular junctions
  • cell-cell contacts
  • cytosol
  • membrane ruffles
  • lateral plasma membrane
  • alpha granules
  • neurites
  • Z line
  • early endosomes
  • actin stress fibers
  • tight junctions
  • membrane rafts
  • cellular protrusions
  • pseudopodia
  • filopodia
  • cell membrane leading edge
  • exosomes
  • lamellipodia
  • microspikes

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human ACTN4 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • vesicle transport along actin filament
  • protein transport
  • muscle cell development
  • negative regulation of substrate adhesion-dependent cell spreading
  • regulation of apoptotic process
  • positive regulation of transcription from RNA polymerase II promoter
  • tumor necrosis factor-mediated signaling pathway
  • retinoic acid receptor signaling pathway
  • positive regulation of sodium:hydrogen antiporter activity
  • actin cytoskeleton organization
  • peroxisome proliferator activated receptor signaling pathway
  • positive regulation of cell migration

Cellular Component

Where in the cell the gene product is active
  • platelet alpha granule lumen
  • extracellular region
  • cell projection
  • plasma membrane
  • nucleus
  • Z disc
  • extracellular space
  • extracellular vesicular exosome
  • perinuclear region of cytoplasm
  • focal adhesion
  • cytoplasm
  • stress fiber
  • actin cytoskeleton
  • cell junction
  • pseudopodium
  • macromolecular complex
  • cortical actin cytoskeleton

Molecular Function

What the gene product does at the molecular level
  • chromatin DNA binding
  • ligand-dependent nuclear receptor binding
  • protein homodimerization activity
  • RNA polymerase II regulatory region sequence-specific DNA binding
  • integrin binding
  • ion channel binding
  • retinoic acid receptor binding
  • nucleoside binding
  • actin filament binding
  • RNA binding
  • protein binding
  • actin binding
  • transcription coactivator activity
  • calcium ion binding
  • ligand-dependent nuclear receptor transcription coactivator activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.