SPHK1 Gene Summary [Human]

The protein encoded by this gene catalyzes the phosphorylation of sphingosine to form sphingosine-1-phosphate (S1P), a lipid mediator with both intra- and extracellular functions. Intracellularly, S1P regulates proliferation and survival, and extracellularly, it is a ligand for cell surface G protein-coupled receptors. This protein, and its product S1P, play a key role in TNF-alpha signaling and the NF-kappa-B activation pathway important in inflammatory, antiapoptotic, and immune processes. Phosphorylation of this protein alters its catalytic activity and promotes its translocation to the plasma membrane. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Sep 2017]

Details

Type
Protein Coding
Official Symbol
SPHK1
Official Name
sphingosine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11240]
Ensembl ID
ENSG00000176170
Bio databases IDs NCBI: 8877 Ensembl: ENSG00000176170
Aliases sphingosine kinase 1
Synonyms 1110006G24Rik, SK1, Sphingosine kinase, sphingosine kinase 1, SPHK, Sphk1a, Spk1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SPHK1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • traf2 binding domain
  • bioactive lipid receptor
  • lipid kinase
  • lipid binding
  • calmodulin binding
  • catalytic domain
  • ATP-binding domain
  • protein phosphatase binding
  • D-erythro-sphingosine kinase
  • ATP binding
  • protein binding
  • magnesium ion binding
  • DNA binding
  • phosphorylation site
  • Diacylglycerol kinase catalytic domain (presumed)
  • kinase
  • sphinganine kinase
  • TRAF binding domain
  • Diacylglycerol kinase catalytic domain
  • acetyltransferase

Pathways

Biological processes and signaling networks where the SPHK1 gene in human plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • non-small cell lung cancer
  • neoplasia
  • hepatocellular carcinoma
  • liver cancer
  • epithelial cancer
  • lung adenocarcinoma
  • lung adenocarcinoma formation
  • systemic lupus erythematosus
  • rheumatoid arthritis
  • medulloblastoma SHH subtype
regulated by
  • TNF
  • lipopolysaccharide
  • Ca2+
  • progesterone
  • TGFB2
  • hydrogen peroxide
  • APP
  • CA074-methyl ester
  • TGFB1
  • cobalt chloride
regulates
role in cell
  • apoptosis
  • expression in
  • cell death
  • cell viability
  • phosphorylation in
  • activation
  • differentiation
  • molecular cleavage in
  • proliferation
  • migration

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • detergent-insoluble fractions
  • membrane fraction
  • intracellular membrane-bounded organelle
  • presynaptic regions
  • cilia
  • perinuclear region
  • cellular membrane
  • Nucleus
  • Plasma Membrane
  • endosomes
  • lysosome
  • cytosol
  • endosomal membrane
  • nucleoplasm
  • synaptic vesicles
  • neurites
  • endocytotic vesicle
  • clathrin-coated pits
  • axons
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SPHK1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • cell proliferation
  • sphingosine biosynthetic process
  • positive regulation of mitosis
  • positive regulation of NF-kappaB transcription factor activity
  • sphingosine-1-phosphate signaling pathway
  • positive regulation of angiogenesis
  • positive regulation of smooth muscle contraction
  • positive regulation of cell growth
  • inflammatory response
  • blood vessel development
  • positive regulation of fibroblast proliferation
  • positive regulation of interleukin-17 production
  • positive regulation of protein ubiquitination
  • DNA biosynthetic process
  • cellular response to hydrogen peroxide
  • regulation of endocytosis
  • phosphorylation
  • calcium-mediated signaling
  • intracellular signal transduction
  • sphingolipid biosynthetic process
  • negative regulation of ceramide biosynthetic process
  • sphingosine metabolic process
  • protein acetylation
  • sphingoid catabolic process
  • brain development
  • positive regulation of mitotic cell cycle
  • positive regulation of p38MAPK cascade
  • negative regulation of apoptotic process
  • cellular response to growth factor stimulus
  • regulation of tumor necrosis factor-mediated signaling pathway
  • positive regulation of peptidyl-threonine phosphorylation
  • regulation of interleukin-1 beta production
  • cellular response to vascular endothelial growth factor stimulus
  • regulation of phagocytosis
  • response to tumor necrosis factor
  • positive regulation of cell migration

Cellular Component

Where in the cell the gene product is active
  • early endosome membrane
  • endocytic vesicle
  • nucleus
  • cytoplasm
  • coated pit
  • intracellular membrane-bounded organelle
  • membrane
  • cytosol
  • plasma membrane
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • sphinganine kinase activity
  • sphingosine-1-phosphate receptor activity
  • acetyltransferase activity
  • lipid binding
  • magnesium ion binding
  • ATP binding
  • DNA binding
  • calmodulin binding
  • D-erythro-sphingosine kinase activity
  • protein binding
  • lipid kinase activity
  • protein phosphatase 2A binding

Gene-Specific Assays for Results You Can Trust

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