Apod Gene Summary [Mouse]

The protein encoded by this gene is a component of high-density lipoprotein (HDL), but is unique in that it shares greater structural similarity to lipocalin than to other members of the apolipoprotein family, and has a wider tissue expression pattern. The encoded protein is involved in lipid metabolism, and ablation of this gene results in defects in triglyceride metabolism. Elevated levels of this gene product have been observed in multiple tissues of Niemann-Pick disease mouse models, as well as in some tumors. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2014]

Details

Type
Protein Coding
Official Symbol
Apod
Official Name
apolipoprotein D [Source:MGI Symbol;Acc:MGI:88056]
Ensembl ID
ENSMUSG00000022548
Bio databases IDs NCBI: 11815 Ensembl: ENSMUSG00000022548
Aliases apolipoprotein D
Synonyms AOPDGN, apolipoprotein D, LOC100047583
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Apod often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • cholesterol binding
  • lipocalin/cytosolic fatty acid-binding protein family
  • protein binding
  • Lipocalin / cytosolic fatty-acid binding protein family
  • transporter

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • Alzheimer disease
  • hypertrophic scarring
  • psoriasis
  • aldosterone producing adrenocortical adenoma
  • adenoma formation
  • chromophobe renal cell carcinoma
  • chromophobe renal cancer
  • Huntington disease
  • lung squamous cell carcinoma
  • squamous cell lung cancer
regulated by
  • TCR (complex)
  • progesterone
  • beta-estradiol
  • dexamethasone
  • DICER1
  • PPARGC1A
  • BSG
  • LA-4 cells
  • dihydrotestosterone
  • GW3965
regulates
role in cell
  • proliferation
  • cell viability
  • number
  • assembly
  • regulation
  • cellular infiltration by
  • migration by
  • response

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Extracellular Space
  • Cytoplasm
  • intracellular space
  • perinuclear region
  • cellular membrane
  • ribosome
  • Plasma Membrane
  • vesicles
  • Endoplasmic Reticulum
  • granules
  • cytosol
  • nuclear envelope
  • perikaryon
  • dendrites
  • phagosomes
  • plasma

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Apod gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • peripheral nervous system axon regeneration
  • negative regulation of protein import into nucleus
  • negative regulation of smooth muscle cell-matrix adhesion
  • negative regulation of cytokine production involved in inflammatory response
  • response to axon injury
  • brain development
  • glucose metabolic process
  • tissue regeneration
  • response to reactive oxygen species
  • negative regulation of lipoprotein lipid oxidation
  • negative regulation of focal adhesion assembly
  • lipid transport
  • negative regulation of T cell migration
  • angiogenesis
  • negative regulation of smooth muscle cell proliferation
  • lipid metabolic process
  • negative regulation of monocyte chemotactic protein-1 production
  • negative regulation of platelet-derived growth factor receptor signaling pathway

Cellular Component

Where in the cell the gene product is active
  • dendrite
  • extracellular space
  • extracellular vesicular exosome
  • perinuclear region of cytoplasm
  • cytosolic ribosome
  • cytoplasm
  • endoplasmic reticulum
  • neuronal cell body
  • extracellular region

Molecular Function

What the gene product does at the molecular level
  • protein binding
  • cholesterol binding
  • lipid transporter activity

Gene-Specific Assays for Results You Can Trust

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