SUV39H1 Gene Summary [Human]

This gene encodes an evolutionarily-conserved protein containing an N-terminal chromodomain and a C-terminal SET domain. The encoded protein is a histone methyltransferase that trimethylates lysine 9 of histone H3, which results in transcriptional gene silencing. Loss of function of this gene disrupts heterochromatin formation and may cause chromosome instability. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013]

Details

Type
Protein Coding
Official Symbol
SUV39H1
Official Name
suppressor of variegation 3-9 homolog 1 [Source:HGNC Symbol;Acc:HGNC:11479]
Ensembl ID
ENSG00000101945
Bio databases IDs NCBI: 6839 Ensembl: ENSG00000101945
Aliases suppressor of variegation 3-9 homolog 1, SUV39H1 histone lysine methyltransferase
Synonyms DXHXS7466e, H3-K9-HMTase 1, KMT1A, MG44, mIS6, RGD1565028, suppressor of variegation 3-9 1, SUV39H, SUV39H1 histone lysine methyltransferase, Suv39h1l1
Species
Human, Homo sapiens
OrthologiesMouseRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in human SUV39H1 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Chromatin organization modifier domain
  • SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
  • nucleic acid binding
  • chromatin binding
  • enzyme
  • protein binding
  • sequence-specific DNA binding
  • S-adenosylmethionine-dependent methyltransferase
  • histone lysine N-methyltransferase activity (H3-K9 specific)
  • Pre-SET motif
  • protein methyltransferase
  • histone methyltransferase
  • CHROMO (CHRromatin Organization Modifier) domains and chromo shadow domains
  • double-stranded DNA binding
  • SET domain
  • SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain superfamily
  • Chromo (CHRromatin organization MOdifier) domain
  • N-terminal to some SET domains

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • neoplasia
  • acute myeloid leukemia
  • tumorigenesis
  • KMT2A rearrangement positive acute myeloid leukemia
regulated by
regulates
role in cell
  • proliferation
  • binding
  • expression in
  • formation
  • production in
  • cell viability
  • binding in
  • growth
  • transcription in
  • cell cycle progression

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • heterochromatin
  • centromeric region
  • nuclear foci
  • chromosome
  • nucleoplasm
  • nucleoli
  • nuclear bodies
  • chromosomal arms
  • chromatin

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the human SUV39H1 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • negative regulation of cell cycle
  • regulation of transcription by glucose
  • rRNA processing
  • chromatin organization
  • response to DNA damage stimulus
  • circadian rhythm
  • cellular response to glucose starvation
  • negative regulation of transcription from RNA polymerase II promoter
  • negative regulation of transcription, DNA-dependent
  • chromatin silencing at rDNA
  • energy homeostasis
  • cell differentiation
  • cellular response to hypoxia
  • methylation

Cellular Component

Where in the cell the gene product is active
  • heterochromatin
  • nucleus
  • cytoplasmic vesicle
  • rDNA heterochromatin
  • chromosome, centromeric region
  • nucleolus
  • nuclear lamina
  • plasma membrane
  • chromatin silencing complex
  • condensed nuclear chromosome
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • zinc ion binding
  • protein binding
  • histone methyltransferase activity
  • histone methyltransferase activity (H3-K9 specific)
  • transcription regulatory region sequence-specific DNA binding
  • chromatin binding
  • S-adenosylmethionine-dependent methyltransferase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.