Cpsf3 Gene Summary [Mouse]

Enables 5'-3' RNA exonuclease activity; RNA binding activity; and RNA endonuclease activity. Involved in mRNA 3'-end processing by stem-loop binding activity and cleavage. Part of mRNA cleavage and polyadenylation specificity factor complex. Orthologous to human CPSF3 (cleavage and polyadenylation specific factor 3). [provided by Alliance of Genome Resources, Jul 2025]

Details

Type
Protein Coding
Official Symbol
Cpsf3
Official Name
cleavage and polyadenylation specificity factor 3 [Source:MGI Symbol;Acc:MGI:1859328]
Ensembl ID
ENSMUSG00000054309
Bio databases IDs NCBI: 54451 Ensembl: ENSMUSG00000054309
Aliases cleavage and polyadenylation specificity factor 3
Synonyms cleavage and polyadenylation specific factor 3, cleavage and polyadenylation specificity factor 3, CPSF-73, Cpsf 73kDa, NEDMHS, NEDMHSN
Species
Mouse, Mus musculus
OrthologiesHumanRat

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in mouse Cpsf3 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • Beta-lactamase superfamily domain
  • Beta-Casp domain
  • Metallo-beta-lactamase superfamily
  • metal ion binding
  • 5'-3' exoribonuclease
  • endoribonuclease
  • enzyme
  • protein binding
  • Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term
  • metallo-hydrolase-like_MBL-fold
  • RNA binding
  • Zn-dependent metallo-hydrolase RNA specificity domain

Pathways

Biological processes and signaling networks where the Cpsf3 gene in mouse plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • hepatocellular carcinoma
  • organismal death
  • neurodevelopmental disorder with microcephaly, hypotonia, nystagmus, and seizures
  • liver cancer
  • epithelial cancer
  • neurodevelopmental disorder with hypotonia, microcephaly, and seizures
  • bladder cancer
regulated by
role in cell
  • migration
  • expression in
  • proliferation
  • differentiation
  • biogenesis in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Nucleus
  • nuclear fraction
  • nucleoplasm
  • interchromatin granule clusters

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the mouse Cpsf3 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • positive regulation of G1/S transition of mitotic cell cycle
  • histone mRNA 3'-end processing
  • mRNA 3'-end processing

Cellular Component

Where in the cell the gene product is active
  • mRNA cleavage and polyadenylation specificity factor complex
  • nucleoplasm

Molecular Function

What the gene product does at the molecular level
  • 5'-3' exoribonuclease activity
  • protein binding
  • RNA binding
  • metal ion binding
  • endoribonuclease activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.