Tgm2 Gene Summary [Rat]

Transglutaminases are enzymes that catalyze the crosslinking of proteins by epsilon-gamma glutamyl lysine isopeptide bonds. While the primary structure of transglutaminases is not conserved, they all have the same amino acid sequence at their active sites and their activity is calcium-dependent. The protein encoded by this gene acts as a monomer, is induced by retinoic acid, and appears to be involved in apoptosis. Finally, the encoded protein is the autoantigen implicated in celiac disease. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

Details

Type
Protein Coding
Official Symbol
Tgm2
Official Name
transglutaminase 2 [Source:RGD Symbol;Acc:621081]
Ensembl ID
ENSRNOG00000012956
Bio databases IDs NCBI: 56083 Ensembl: ENSRNOG00000012956
Aliases transglutaminase 2
Synonyms Ftg, G[a]h, G(h), hTG2, TG2, TGA2, TGASE, TGase2, TGase C, TgaseII, TGC, TG(C), TGII, TISSUE TRANSGLUTAMINASE, TISSUE TRANSGLUTAMINASE 2, Tranglutaminase 2, Transglutaminase, TRANSGLUTAMINASE 2, transglutaminase 2, C polypeptide, tTG, tTGas, T-Tgase
Species
Rat, Rattus norvegicus
OrthologiesHumanMouse

Protein Domains

A protein domain is a distinct structural or functional region within a protein that can evolve, function, and exist independently of the rest of the protein chain. These domains in rat Tgm2 often fold into stable, three-dimensional structures and are associated with specific biological functions, such as binding to DNA, other proteins, or small molecules.
  • N-acyltransferase
  • catalytic domain
  • calcium ion binding
  • heparin binding domain
  • enzyme binding
  • protein domain specific binding
  • enzyme
  • protein binding
  • Transglutaminase family, C-terminal ig like domain
  • transaminase
  • core domain, functional
  • identical protein binding
  • GTP binding
  • Transglutaminase-like superfamily
  • Transglutaminase/protease-like homologues
  • Bcl-2 homology 3 domain
  • protein-glutamine gamma-glutamyltransferase
  • aminotransferase domain
  • protein-glutamine glutaminase
  • Transglutaminase family

Pathways

Biological processes and signaling networks where the Tgm2 gene in rat plays a role, providing insight into its function and relevance in health or disease.

Top Findings

The most significant associations for this gene, including commonly observed domains, pathway involvement, and functional highlights based on current data.
disease
  • metastasis
  • neoplasia
  • seizures
  • renal cancer
  • systemic lupus erythematosus
  • psoriasis
  • colorectal cancer
  • Alzheimer disease
  • cancer
  • tumorigenesis
regulated by
  • calcitriol
  • TNF
  • tetradecanoylphorbol acetate
  • IL1B
  • ascorbic acid
  • ERK
  • corticosterone
  • BMP4
  • interferon alpha
  • calphostin C
regulates
role in cell
  • differentiation
  • survival
  • production in
  • cell death
  • condensation
  • condensation in
  • binding
  • proliferation
  • expression in
  • phosphorylation in

Subcellular Expression

Locations within the cell where the protein is known or predicted to be active, providing insight into its function and cellular context.
  • Cytoplasm
  • membrane fraction
  • detergent resistant lipid raft fraction
  • invadopodia
  • cell-matrix contacts
  • cell surface
  • cell borders
  • Extracellular Space
  • cell periphery
  • perinuclear region
  • cellular tail
  • membrane surface
  • cellular membrane
  • Nucleus
  • Plasma Membrane
  • Mitochondria
  • intercellular junctions
  • cytosol
  • sinusoidal membrane
  • nucleosomes
  • extracellular matrix
  • cell membrane leading edge
  • chromatin
  • cell-matrix adherens junctions
  • cytosolic fraction

Gene Ontology Annotations

Describes the biological processes, cellular components, and molecular functions associated with the rat Tgm2 gene, providing context for its role in the cell.

Biological Process

Functions and activities the gene product is involved in
  • salivary gland cavitation
  • dopamine secretion
  • reduction of endoplasmic reticulum calcium ion concentration
  • apoptotic cell clearance
  • regulation of apoptotic process
  • positive regulation of cell adhesion
  • phospholipase C-activating G-protein coupled receptor signaling pathway
  • branching involved in salivary gland morphogenesis
  • positive regulation of GTPase activity
  • bone development
  • positive regulation of small GTPase mediated signal transduction
  • chromatin remodeling
  • elevation of mitochondrial calcium ion concentration
  • positive regulation of apoptotic process
  • proteolysis
  • cellular response to cocaine
  • protein deamination
  • gene expression
  • positive regulation of neurogenesis
  • regulation of apoptotic cell clearance
  • peptide cross-linking

Cellular Component

Where in the cell the gene product is active
  • nucleus
  • extracellular vesicular exosome
  • perinuclear region of cytoplasm
  • focal adhesion
  • mitochondrion
  • cytosol
  • endoplasmic reticulum
  • extracellular matrix
  • nucleosome
  • chromatin
  • plasma membrane

Molecular Function

What the gene product does at the molecular level
  • GTP binding
  • protein-glutamine gamma-glutamyltransferase activity
  • protein binding
  • calcium ion binding
  • peptidase activity
  • protein-glutamine glutaminase activity

Gene-Specific Assays for Results You Can Trust

Streamline your workflow with assays designed for this gene. Our targeted dPCR and qPCR assays help you generate meaningful data – efficiently and accurately.